Protein–RNA interactions for Protein: J3QPP8

Alkal1, ALK and LTK ligand 1, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alkal1J3QPP8 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Alkal1J3QPP8 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Alkal1J3QPP8 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Alkal1J3QPP8 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Alkal1J3QPP8 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Alkal1J3QPP8 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.37■□□□□ 0.85
Alkal1J3QPP8 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.37■□□□□ 0.85
Alkal1J3QPP8 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.37■□□□□ 0.85
Alkal1J3QPP8 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Alkal1J3QPP8 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Alkal1J3QPP8 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Alkal1J3QPP8 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Alkal1J3QPP8 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Alkal1J3QPP8 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.36■□□□□ 0.85
Alkal1J3QPP8 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
Alkal1J3QPP8 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Alkal1J3QPP8 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Alkal1J3QPP8 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.34■□□□□ 0.85
Alkal1J3QPP8 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Alkal1J3QPP8 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Alkal1J3QPP8 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Alkal1J3QPP8 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Alkal1J3QPP8 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Alkal1J3QPP8 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Alkal1J3QPP8 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.33■□□□□ 0.85
Alkal1J3QPP8 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Alkal1J3QPP8 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Alkal1J3QPP8 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Alkal1J3QPP8 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Alkal1J3QPP8 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Alkal1J3QPP8 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Alkal1J3QPP8 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Alkal1J3QPP8 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.32■□□□□ 0.84
Alkal1J3QPP8 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Alkal1J3QPP8 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Alkal1J3QPP8 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.32■□□□□ 0.84
Alkal1J3QPP8 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Alkal1J3QPP8 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Alkal1J3QPP8 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Alkal1J3QPP8 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Alkal1J3QPP8 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Alkal1J3QPP8 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Alkal1J3QPP8 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Alkal1J3QPP8 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Alkal1J3QPP8 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.31■□□□□ 0.84
Alkal1J3QPP8 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.31■□□□□ 0.84
Alkal1J3QPP8 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
Alkal1J3QPP8 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Alkal1J3QPP8 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Alkal1J3QPP8 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Alkal1J3QPP8 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.3■□□□□ 0.84
Alkal1J3QPP8 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Alkal1J3QPP8 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Alkal1J3QPP8 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Alkal1J3QPP8 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.3■□□□□ 0.84
Alkal1J3QPP8 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.3■□□□□ 0.84
Alkal1J3QPP8 Cap2-205ENSMUST00000225824 1634 ntBASIC20.3■□□□□ 0.84
Alkal1J3QPP8 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Alkal1J3QPP8 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Alkal1J3QPP8 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Alkal1J3QPP8 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Alkal1J3QPP8 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
Alkal1J3QPP8 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Alkal1J3QPP8 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Alkal1J3QPP8 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Alkal1J3QPP8 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Alkal1J3QPP8 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Alkal1J3QPP8 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Alkal1J3QPP8 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.29■□□□□ 0.84
Alkal1J3QPP8 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Alkal1J3QPP8 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Alkal1J3QPP8 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Alkal1J3QPP8 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Alkal1J3QPP8 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.28■□□□□ 0.84
Alkal1J3QPP8 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Alkal1J3QPP8 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Alkal1J3QPP8 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Alkal1J3QPP8 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Alkal1J3QPP8 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Alkal1J3QPP8 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Alkal1J3QPP8 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Alkal1J3QPP8 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Alkal1J3QPP8 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Alkal1J3QPP8 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Alkal1J3QPP8 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Alkal1J3QPP8 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Alkal1J3QPP8 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Alkal1J3QPP8 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Alkal1J3QPP8 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Alkal1J3QPP8 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Alkal1J3QPP8 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Alkal1J3QPP8 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.26■□□□□ 0.83
Alkal1J3QPP8 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Alkal1J3QPP8 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.26■□□□□ 0.83
Alkal1J3QPP8 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Alkal1J3QPP8 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Alkal1J3QPP8 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Alkal1J3QPP8 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Alkal1J3QPP8 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Alkal1J3QPP8 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms