Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.75■□□□□ 0.91
Srp54bE9PXC0 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Srp54bE9PXC0 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Srp54bE9PXC0 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Srp54bE9PXC0 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Srp54bE9PXC0 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Srp54bE9PXC0 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Srp54bE9PXC0 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Srp54bE9PXC0 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Srp54bE9PXC0 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Srp54bE9PXC0 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.74■□□□□ 0.91
Srp54bE9PXC0 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Srp54bE9PXC0 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Srp54bE9PXC0 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Srp54bE9PXC0 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Srp54bE9PXC0 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Srp54bE9PXC0 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.73■□□□□ 0.91
Srp54bE9PXC0 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Srp54bE9PXC0 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.73■□□□□ 0.91
Srp54bE9PXC0 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.73■□□□□ 0.91
Srp54bE9PXC0 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.73■□□□□ 0.91
Srp54bE9PXC0 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.73■□□□□ 0.91
Srp54bE9PXC0 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Srp54bE9PXC0 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Srp54bE9PXC0 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Srp54bE9PXC0 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Srp54bE9PXC0 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Srp54bE9PXC0 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Srp54bE9PXC0 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
Srp54bE9PXC0 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Srp54bE9PXC0 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.72■□□□□ 0.91
Srp54bE9PXC0 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.72■□□□□ 0.91
Srp54bE9PXC0 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Srp54bE9PXC0 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Srp54bE9PXC0 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.72■□□□□ 0.91
Srp54bE9PXC0 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
Srp54bE9PXC0 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Srp54bE9PXC0 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Srp54bE9PXC0 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.71■□□□□ 0.91
Srp54bE9PXC0 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.71■□□□□ 0.91
Srp54bE9PXC0 Golgb1-201ENSMUST00000023534 498 ntBASIC20.71■□□□□ 0.91
Srp54bE9PXC0 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Srp54bE9PXC0 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Srp54bE9PXC0 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Srp54bE9PXC0 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.91
Srp54bE9PXC0 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Srp54bE9PXC0 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Srp54bE9PXC0 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Srp54bE9PXC0 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Srp54bE9PXC0 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Srp54bE9PXC0 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.7■□□□□ 0.9
Srp54bE9PXC0 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Srp54bE9PXC0 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Srp54bE9PXC0 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Srp54bE9PXC0 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Srp54bE9PXC0 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Srp54bE9PXC0 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Srp54bE9PXC0 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.69■□□□□ 0.9
Srp54bE9PXC0 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.69■□□□□ 0.9
Srp54bE9PXC0 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Srp54bE9PXC0 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Srp54bE9PXC0 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Srp54bE9PXC0 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Srp54bE9PXC0 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Srp54bE9PXC0 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Srp54bE9PXC0 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Srp54bE9PXC0 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.68■□□□□ 0.9
Srp54bE9PXC0 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.68■□□□□ 0.9
Srp54bE9PXC0 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Srp54bE9PXC0 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Srp54bE9PXC0 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.68■□□□□ 0.9
Srp54bE9PXC0 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Srp54bE9PXC0 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Srp54bE9PXC0 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.67■□□□□ 0.9
Srp54bE9PXC0 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Srp54bE9PXC0 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Srp54bE9PXC0 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Srp54bE9PXC0 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Srp54bE9PXC0 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.66■□□□□ 0.9
Srp54bE9PXC0 Gm12821-201ENSMUST00000120022 600 ntBASIC20.66■□□□□ 0.9
Srp54bE9PXC0 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Srp54bE9PXC0 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Srp54bE9PXC0 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Srp54bE9PXC0 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Srp54bE9PXC0 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Srp54bE9PXC0 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Srp54bE9PXC0 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Srp54bE9PXC0 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Srp54bE9PXC0 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.66■□□□□ 0.9
Srp54bE9PXC0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Srp54bE9PXC0 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Srp54bE9PXC0 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Srp54bE9PXC0 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Srp54bE9PXC0 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Srp54bE9PXC0 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Srp54bE9PXC0 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Srp54bE9PXC0 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Srp54bE9PXC0 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Srp54bE9PXC0 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.64■□□□□ 0.89
Srp54bE9PXC0 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms