Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Gm28043E0CXC2 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.92■□□□□ 0.94
Gm28043E0CXC2 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm28043E0CXC2 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm28043E0CXC2 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.92■□□□□ 0.94
Gm28043E0CXC2 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gm28043E0CXC2 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gm28043E0CXC2 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.91■□□□□ 0.94
Gm28043E0CXC2 Gm10420-201ENSMUST00000121713 882 ntBASIC20.91■□□□□ 0.94
Gm28043E0CXC2 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gm28043E0CXC2 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gm28043E0CXC2 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Gm28043E0CXC2 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Gm28043E0CXC2 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Gm28043E0CXC2 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gm28043E0CXC2 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
Gm28043E0CXC2 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.9■□□□□ 0.94
Gm28043E0CXC2 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gm28043E0CXC2 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Gm28043E0CXC2 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gm28043E0CXC2 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.9■□□□□ 0.94
Gm28043E0CXC2 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Gm28043E0CXC2 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Gm28043E0CXC2 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gm28043E0CXC2 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Gm28043E0CXC2 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gm28043E0CXC2 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gm28043E0CXC2 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gm28043E0CXC2 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gm28043E0CXC2 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gm28043E0CXC2 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Gm28043E0CXC2 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gm28043E0CXC2 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm28043E0CXC2 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.88■□□□□ 0.93
Gm28043E0CXC2 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Gm28043E0CXC2 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Gm28043E0CXC2 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm28043E0CXC2 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.88■□□□□ 0.93
Gm28043E0CXC2 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm28043E0CXC2 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm28043E0CXC2 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Gm28043E0CXC2 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm28043E0CXC2 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gm28043E0CXC2 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Gm28043E0CXC2 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Gm28043E0CXC2 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Gm28043E0CXC2 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Gm28043E0CXC2 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gm28043E0CXC2 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Gm28043E0CXC2 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Gm28043E0CXC2 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm28043E0CXC2 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm28043E0CXC2 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Gm28043E0CXC2 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm28043E0CXC2 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
Gm28043E0CXC2 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Gm28043E0CXC2 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gm28043E0CXC2 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gm28043E0CXC2 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gm28043E0CXC2 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gm28043E0CXC2 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Gm28043E0CXC2 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Gm28043E0CXC2 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.85■□□□□ 0.93
Gm28043E0CXC2 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gm28043E0CXC2 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm28043E0CXC2 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm28043E0CXC2 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm28043E0CXC2 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm28043E0CXC2 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.84■□□□□ 0.93
Gm28043E0CXC2 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.84■□□□□ 0.93
Gm28043E0CXC2 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.84■□□□□ 0.93
Gm28043E0CXC2 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Gm28043E0CXC2 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm28043E0CXC2 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm28043E0CXC2 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm28043E0CXC2 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gm28043E0CXC2 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gm28043E0CXC2 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gm28043E0CXC2 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Gm28043E0CXC2 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Gm28043E0CXC2 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Gm28043E0CXC2 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Gm28043E0CXC2 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm28043E0CXC2 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm28043E0CXC2 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Gm28043E0CXC2 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm28043E0CXC2 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
Gm28043E0CXC2 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Gm28043E0CXC2 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm28043E0CXC2 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm28043E0CXC2 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.81■□□□□ 0.92
Gm28043E0CXC2 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm28043E0CXC2 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.81■□□□□ 0.92
Gm28043E0CXC2 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.8■□□□□ 0.92
Gm28043E0CXC2 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Gm28043E0CXC2 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm28043E0CXC2 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm28043E0CXC2 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Gm28043E0CXC2 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.79■□□□□ 0.92
Gm28043E0CXC2 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms