Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Gm12887B1AVM1 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm12887B1AVM1 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm12887B1AVM1 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Gm12887B1AVM1 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Gm12887B1AVM1 Gm4430-201ENSMUST00000192413 1943 ntBASIC16.98■□□□□ 0.31
Gm12887B1AVM1 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm12887B1AVM1 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC16.98■□□□□ 0.31
Gm12887B1AVM1 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Gm12887B1AVM1 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm12887B1AVM1 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm12887B1AVM1 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm12887B1AVM1 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm12887B1AVM1 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Gm12887B1AVM1 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.98■□□□□ 0.31
Gm12887B1AVM1 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gm12887B1AVM1 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Gm12887B1AVM1 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gm12887B1AVM1 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Gm12887B1AVM1 Gm6821-201ENSMUST00000107540 542 ntBASIC16.97■□□□□ 0.31
Gm12887B1AVM1 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gm12887B1AVM1 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gm12887B1AVM1 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gm12887B1AVM1 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Gm12887B1AVM1 Gm9939-201ENSMUST00000067161 1154 ntBASIC16.96■□□□□ 0.31
Gm12887B1AVM1 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Gm12887B1AVM1 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Gm12887B1AVM1 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Gm12887B1AVM1 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm12887B1AVM1 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC16.95■□□□□ 0.3
Gm12887B1AVM1 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Gm12887B1AVM1 Gm45364-201ENSMUST00000210883 159 ntBASIC16.95■□□□□ 0.3
Gm12887B1AVM1 AC154454.1-201ENSMUST00000225253 216 ntBASIC16.95■□□□□ 0.3
Gm12887B1AVM1 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Gm12887B1AVM1 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm12887B1AVM1 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Gm12887B1AVM1 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC16.95■□□□□ 0.3
Gm12887B1AVM1 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm12887B1AVM1 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Gm12887B1AVM1 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm12887B1AVM1 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm12887B1AVM1 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm12887B1AVM1 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Gm12887B1AVM1 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Gm12887B1AVM1 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm12887B1AVM1 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.94■□□□□ 0.3
Gm12887B1AVM1 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm12887B1AVM1 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.93■□□□□ 0.3
Gm12887B1AVM1 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Gm12887B1AVM1 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Gm12887B1AVM1 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.93■□□□□ 0.3
Gm12887B1AVM1 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm12887B1AVM1 Iqck-206ENSMUST00000208658 2891 ntBASIC16.93■□□□□ 0.3
Gm12887B1AVM1 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC16.93■□□□□ 0.3
Gm12887B1AVM1 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Gm12887B1AVM1 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm12887B1AVM1 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm12887B1AVM1 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm12887B1AVM1 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Gm12887B1AVM1 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm12887B1AVM1 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Gm12887B1AVM1 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm12887B1AVM1 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm12887B1AVM1 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm12887B1AVM1 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm12887B1AVM1 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm12887B1AVM1 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Gm12887B1AVM1 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.91■□□□□ 0.3
Gm12887B1AVM1 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm12887B1AVM1 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm12887B1AVM1 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Gm12887B1AVM1 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Gm12887B1AVM1 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm12887B1AVM1 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm12887B1AVM1 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Gm12887B1AVM1 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm12887B1AVM1 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm12887B1AVM1 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gm12887B1AVM1 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC16.9■□□□□ 0.3
Gm12887B1AVM1 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gm12887B1AVM1 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Gm12887B1AVM1 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Gm12887B1AVM1 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Gm12887B1AVM1 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gm12887B1AVM1 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gm12887B1AVM1 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Gm12887B1AVM1 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gm12887B1AVM1 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gm12887B1AVM1 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Gm12887B1AVM1 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.89■□□□□ 0.29
Gm12887B1AVM1 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gm12887B1AVM1 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Gm12887B1AVM1 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Gm12887B1AVM1 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gm12887B1AVM1 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gm12887B1AVM1 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gm12887B1AVM1 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gm12887B1AVM1 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gm12887B1AVM1 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Gm12887B1AVM1 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms