Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm11127A7VMS2 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm11127A7VMS2 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Gm11127A7VMS2 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm11127A7VMS2 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Gm11127A7VMS2 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.49■□□□□ 0.55
Gm11127A7VMS2 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm11127A7VMS2 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm11127A7VMS2 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gm11127A7VMS2 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gm11127A7VMS2 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Gm11127A7VMS2 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gm11127A7VMS2 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Gm11127A7VMS2 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.48■□□□□ 0.55
Gm11127A7VMS2 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Gm11127A7VMS2 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm11127A7VMS2 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm11127A7VMS2 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Gm11127A7VMS2 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm11127A7VMS2 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm11127A7VMS2 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Gm11127A7VMS2 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm11127A7VMS2 Golph3-202ENSMUST00000226517 2359 ntBASIC18.47■□□□□ 0.55
Gm11127A7VMS2 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gm11127A7VMS2 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Gm11127A7VMS2 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Gm11127A7VMS2 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Gm11127A7VMS2 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gm11127A7VMS2 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Gm11127A7VMS2 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Gm11127A7VMS2 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gm11127A7VMS2 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gm11127A7VMS2 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gm11127A7VMS2 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gm11127A7VMS2 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Gm11127A7VMS2 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm11127A7VMS2 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Gm11127A7VMS2 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Gm11127A7VMS2 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Gm11127A7VMS2 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm11127A7VMS2 Gm11687-201ENSMUST00000118911 886 ntBASIC18.45■□□□□ 0.54
Gm11127A7VMS2 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Gm11127A7VMS2 Gm44428-201ENSMUST00000204474 874 ntBASIC18.45■□□□□ 0.54
Gm11127A7VMS2 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm11127A7VMS2 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm11127A7VMS2 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm11127A7VMS2 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm11127A7VMS2 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Gm11127A7VMS2 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Gm11127A7VMS2 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm11127A7VMS2 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.44■□□□□ 0.54
Gm11127A7VMS2 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Gm11127A7VMS2 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.44■□□□□ 0.54
Gm11127A7VMS2 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Gm11127A7VMS2 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.44■□□□□ 0.54
Gm11127A7VMS2 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm11127A7VMS2 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.43■□□□□ 0.54
Gm11127A7VMS2 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm11127A7VMS2 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Gm11127A7VMS2 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm11127A7VMS2 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm11127A7VMS2 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Gm11127A7VMS2 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm11127A7VMS2 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm11127A7VMS2 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm11127A7VMS2 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Gm11127A7VMS2 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm11127A7VMS2 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Gm11127A7VMS2 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm11127A7VMS2 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm11127A7VMS2 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm11127A7VMS2 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Gm11127A7VMS2 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm11127A7VMS2 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm11127A7VMS2 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Gm11127A7VMS2 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm11127A7VMS2 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm11127A7VMS2 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm11127A7VMS2 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm11127A7VMS2 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm11127A7VMS2 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Gm11127A7VMS2 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC18.4■□□□□ 0.54
Gm11127A7VMS2 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm11127A7VMS2 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Gm11127A7VMS2 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm11127A7VMS2 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm11127A7VMS2 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Gm11127A7VMS2 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Gm11127A7VMS2 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Gm11127A7VMS2 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm11127A7VMS2 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm11127A7VMS2 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Gm11127A7VMS2 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Gm11127A7VMS2 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm11127A7VMS2 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.38■□□□□ 0.53
Gm11127A7VMS2 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm11127A7VMS2 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Gm11127A7VMS2 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm11127A7VMS2 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm11127A7VMS2 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms