Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Chd6A3KFM7 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chd6A3KFM7 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Chd6A3KFM7 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chd6A3KFM7 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chd6A3KFM7 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.6■□□□□ 0.41
Chd6A3KFM7 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chd6A3KFM7 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chd6A3KFM7 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.6■□□□□ 0.41
Chd6A3KFM7 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.6■□□□□ 0.41
Chd6A3KFM7 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chd6A3KFM7 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.6■□□□□ 0.41
Chd6A3KFM7 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chd6A3KFM7 Gm7143-201ENSMUST00000222811 859 ntBASIC17.59■□□□□ 0.41
Chd6A3KFM7 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chd6A3KFM7 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Chd6A3KFM7 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chd6A3KFM7 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Chd6A3KFM7 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.59■□□□□ 0.41
Chd6A3KFM7 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chd6A3KFM7 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Chd6A3KFM7 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chd6A3KFM7 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chd6A3KFM7 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.58■□□□□ 0.41
Chd6A3KFM7 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Chd6A3KFM7 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
Chd6A3KFM7 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chd6A3KFM7 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.57■□□□□ 0.4
Chd6A3KFM7 Gm43060-201ENSMUST00000200621 289 ntBASIC17.57■□□□□ 0.4
Chd6A3KFM7 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chd6A3KFM7 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chd6A3KFM7 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chd6A3KFM7 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chd6A3KFM7 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Chd6A3KFM7 Gm12251-201ENSMUST00000117893 792 ntBASIC17.56■□□□□ 0.4
Chd6A3KFM7 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.56■□□□□ 0.4
Chd6A3KFM7 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.56■□□□□ 0.4
Chd6A3KFM7 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.56■□□□□ 0.4
Chd6A3KFM7 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Chd6A3KFM7 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd6A3KFM7 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd6A3KFM7 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.56■□□□□ 0.4
Chd6A3KFM7 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd6A3KFM7 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chd6A3KFM7 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chd6A3KFM7 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd6A3KFM7 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd6A3KFM7 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd6A3KFM7 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Chd6A3KFM7 Gm20760-201ENSMUST00000179197 648 ntBASIC17.55■□□□□ 0.4
Chd6A3KFM7 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chd6A3KFM7 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd6A3KFM7 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd6A3KFM7 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd6A3KFM7 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd6A3KFM7 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd6A3KFM7 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC17.53■□□□□ 0.4
Chd6A3KFM7 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd6A3KFM7 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd6A3KFM7 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chd6A3KFM7 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Chd6A3KFM7 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.52■□□□□ 0.39
Chd6A3KFM7 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chd6A3KFM7 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Chd6A3KFM7 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC17.52■□□□□ 0.39
Chd6A3KFM7 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.52■□□□□ 0.39
Chd6A3KFM7 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chd6A3KFM7 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chd6A3KFM7 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chd6A3KFM7 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chd6A3KFM7 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chd6A3KFM7 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chd6A3KFM7 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chd6A3KFM7 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chd6A3KFM7 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Chd6A3KFM7 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Chd6A3KFM7 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.51■□□□□ 0.39
Chd6A3KFM7 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.51■□□□□ 0.39
Chd6A3KFM7 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chd6A3KFM7 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.51■□□□□ 0.39
Chd6A3KFM7 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chd6A3KFM7 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd6A3KFM7 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd6A3KFM7 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd6A3KFM7 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd6A3KFM7 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Chd6A3KFM7 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd6A3KFM7 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd6A3KFM7 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.49■□□□□ 0.39
Chd6A3KFM7 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.49■□□□□ 0.39
Chd6A3KFM7 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Chd6A3KFM7 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chd6A3KFM7 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Chd6A3KFM7 Gm8520-201ENSMUST00000186517 868 ntBASIC17.49■□□□□ 0.39
Chd6A3KFM7 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chd6A3KFM7 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.49■□□□□ 0.39
Chd6A3KFM7 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Chd6A3KFM7 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC17.48■□□□□ 0.39
Chd6A3KFM7 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chd6A3KFM7 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms