Protein–RNA interactions for Protein: A0A0G2JGB9

Trdv2-1, T cell receptor delta variable 2-1 (Fragment), mousemouse

Predictions only

Length 116 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-1A0A0G2JGB9 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Gm28731-201ENSMUST00000185564 1569 ntBASIC15.36■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Gm37136-201ENSMUST00000194368 194 ntBASIC15.35■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trdv2-1A0A0G2JGB9 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trdv2-1A0A0G2JGB9 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC15.35■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trdv2-1A0A0G2JGB9 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trdv2-1A0A0G2JGB9 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC15.33■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.33■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC15.32■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trdv2-1A0A0G2JGB9 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC15.32■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trdv2-1A0A0G2JGB9 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Nkain2-201ENSMUST00000092602 558 ntBASIC15.31■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trdv2-1A0A0G2JGB9 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trdv2-1A0A0G2JGB9 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC15.3■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.28■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Trdv2-1A0A0G2JGB9 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.28■□□□□ 0.04
Trdv2-1A0A0G2JGB9 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trdv2-1A0A0G2JGB9 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trdv2-1A0A0G2JGB9 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms