Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv16A0A0B4J1H3 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv16A0A0B4J1H3 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Trbv16A0A0B4J1H3 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv16A0A0B4J1H3 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC15.24■□□□□ 0.03
Trbv16A0A0B4J1H3 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv16A0A0B4J1H3 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv16A0A0B4J1H3 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv16A0A0B4J1H3 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv16A0A0B4J1H3 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv16A0A0B4J1H3 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv16A0A0B4J1H3 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv16A0A0B4J1H3 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv16A0A0B4J1H3 Hsf1-207ENSMUST00000228371 2102 ntBASIC15.23■□□□□ 0.03
Trbv16A0A0B4J1H3 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
Trbv16A0A0B4J1H3 Kdm3b-204ENSMUST00000224715 2032 ntBASIC15.23■□□□□ 0.03
Trbv16A0A0B4J1H3 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC15.23■□□□□ 0.03
Trbv16A0A0B4J1H3 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv16A0A0B4J1H3 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC15.23■□□□□ 0.03
Trbv16A0A0B4J1H3 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Trbv16A0A0B4J1H3 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv16A0A0B4J1H3 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv16A0A0B4J1H3 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv16A0A0B4J1H3 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv16A0A0B4J1H3 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC15.22■□□□□ 0.03
Trbv16A0A0B4J1H3 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv16A0A0B4J1H3 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv16A0A0B4J1H3 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC15.22■□□□□ 0.03
Trbv16A0A0B4J1H3 Nsd1-206ENSMUST00000224918 1001 ntBASIC15.22■□□□□ 0.03
Trbv16A0A0B4J1H3 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Trbv16A0A0B4J1H3 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC15.22■□□□□ 0.03
Trbv16A0A0B4J1H3 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv16A0A0B4J1H3 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trbv16A0A0B4J1H3 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv16A0A0B4J1H3 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv16A0A0B4J1H3 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv16A0A0B4J1H3 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv16A0A0B4J1H3 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv16A0A0B4J1H3 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv16A0A0B4J1H3 Gm5987-201ENSMUST00000196433 1151 ntBASIC15.21■□□□□ 0.03
Trbv16A0A0B4J1H3 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv16A0A0B4J1H3 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC15.21■□□□□ 0.02
Trbv16A0A0B4J1H3 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trbv16A0A0B4J1H3 Gm44949-201ENSMUST00000206423 1450 ntBASIC15.2■□□□□ 0.02
Trbv16A0A0B4J1H3 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trbv16A0A0B4J1H3 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv16A0A0B4J1H3 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trbv16A0A0B4J1H3 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv16A0A0B4J1H3 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv16A0A0B4J1H3 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv16A0A0B4J1H3 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv16A0A0B4J1H3 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv16A0A0B4J1H3 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv16A0A0B4J1H3 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv16A0A0B4J1H3 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv16A0A0B4J1H3 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv16A0A0B4J1H3 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv16A0A0B4J1H3 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv16A0A0B4J1H3 AC151971.4-201ENSMUST00000214717 704 ntBASIC15.19■□□□□ 0.02
Trbv16A0A0B4J1H3 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv16A0A0B4J1H3 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv16A0A0B4J1H3 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv16A0A0B4J1H3 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv16A0A0B4J1H3 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv16A0A0B4J1H3 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv16A0A0B4J1H3 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trbv16A0A0B4J1H3 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv16A0A0B4J1H3 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv16A0A0B4J1H3 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv16A0A0B4J1H3 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv16A0A0B4J1H3 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv16A0A0B4J1H3 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv16A0A0B4J1H3 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv16A0A0B4J1H3 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv16A0A0B4J1H3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv16A0A0B4J1H3 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv16A0A0B4J1H3 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv16A0A0B4J1H3 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv16A0A0B4J1H3 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trbv16A0A0B4J1H3 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
Trbv16A0A0B4J1H3 Gm5913-201ENSMUST00000119397 1399 ntBASIC15.17■□□□□ 0.02
Trbv16A0A0B4J1H3 AC116713.1-201ENSMUST00000215074 430 ntBASIC15.17■□□□□ 0.02
Trbv16A0A0B4J1H3 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv16A0A0B4J1H3 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv16A0A0B4J1H3 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv16A0A0B4J1H3 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv16A0A0B4J1H3 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trbv16A0A0B4J1H3 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv16A0A0B4J1H3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC15.16■□□□□ 0.02
Trbv16A0A0B4J1H3 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Trbv16A0A0B4J1H3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC15.16■□□□□ 0.02
Trbv16A0A0B4J1H3 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC15.16■□□□□ 0.02
Trbv16A0A0B4J1H3 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv16A0A0B4J1H3 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv16A0A0B4J1H3 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv16A0A0B4J1H3 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv16A0A0B4J1H3 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv16A0A0B4J1H3 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trbv16A0A0B4J1H3 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv16A0A0B4J1H3 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms