Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Golph3-202ENSMUST00000226517 2359 ntBASIC16.42■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv13-3A0A0B4J1H2 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC16.41■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Trbv13-3A0A0B4J1H2 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.39■□□□□ 0.21
Trbv13-3A0A0B4J1H2 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv13-3A0A0B4J1H2 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv13-3A0A0B4J1H2 Gm5987-201ENSMUST00000196433 1151 ntBASIC16.39■□□□□ 0.21
Trbv13-3A0A0B4J1H2 Gm5131-201ENSMUST00000212776 1238 ntBASIC16.39■□□□□ 0.21
Trbv13-3A0A0B4J1H2 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv13-3A0A0B4J1H2 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv13-3A0A0B4J1H2 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Trbv13-3A0A0B4J1H2 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC16.38■□□□□ 0.21
Trbv13-3A0A0B4J1H2 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv13-3A0A0B4J1H2 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv13-3A0A0B4J1H2 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv13-3A0A0B4J1H2 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv13-3A0A0B4J1H2 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv13-3A0A0B4J1H2 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.37■□□□□ 0.21
Trbv13-3A0A0B4J1H2 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv13-3A0A0B4J1H2 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Trbv13-3A0A0B4J1H2 AC122317.2-201ENSMUST00000218708 1248 ntBASIC16.37■□□□□ 0.21
Trbv13-3A0A0B4J1H2 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv13-3A0A0B4J1H2 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.37■□□□□ 0.21
Trbv13-3A0A0B4J1H2 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trbv13-3A0A0B4J1H2 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv13-3A0A0B4J1H2 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv13-3A0A0B4J1H2 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trbv13-3A0A0B4J1H2 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv13-3A0A0B4J1H2 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv13-3A0A0B4J1H2 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv13-3A0A0B4J1H2 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv13-3A0A0B4J1H2 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv13-3A0A0B4J1H2 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.36■□□□□ 0.21
Trbv13-3A0A0B4J1H2 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.35■□□□□ 0.21
Trbv13-3A0A0B4J1H2 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Trbv13-3A0A0B4J1H2 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC16.35■□□□□ 0.21
Trbv13-3A0A0B4J1H2 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv13-3A0A0B4J1H2 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv13-3A0A0B4J1H2 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv13-3A0A0B4J1H2 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv13-3A0A0B4J1H2 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Trbv13-3A0A0B4J1H2 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv13-3A0A0B4J1H2 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv13-3A0A0B4J1H2 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv13-3A0A0B4J1H2 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv13-3A0A0B4J1H2 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv13-3A0A0B4J1H2 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.34■□□□□ 0.21
Trbv13-3A0A0B4J1H2 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv13-3A0A0B4J1H2 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv13-3A0A0B4J1H2 Gm8093-201ENSMUST00000128935 1892 ntBASIC16.33■□□□□ 0.21
Trbv13-3A0A0B4J1H2 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Trbv13-3A0A0B4J1H2 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.33■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.33■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv13-3A0A0B4J1H2 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms