Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sirpb1aA0A0A6YYP6 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sirpb1aA0A0A6YYP6 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sirpb1aA0A0A6YYP6 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sirpb1aA0A0A6YYP6 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sirpb1aA0A0A6YYP6 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.88■□□□□ 0.77
Sirpb1aA0A0A6YYP6 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sirpb1aA0A0A6YYP6 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.88■□□□□ 0.77
Sirpb1aA0A0A6YYP6 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Sirpb1aA0A0A6YYP6 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sirpb1aA0A0A6YYP6 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sirpb1aA0A0A6YYP6 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sirpb1aA0A0A6YYP6 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
Sirpb1aA0A0A6YYP6 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Sirpb1aA0A0A6YYP6 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Sirpb1aA0A0A6YYP6 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.87■□□□□ 0.77
Sirpb1aA0A0A6YYP6 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sirpb1aA0A0A6YYP6 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.87■□□□□ 0.77
Sirpb1aA0A0A6YYP6 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sirpb1aA0A0A6YYP6 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Sirpb1aA0A0A6YYP6 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.86■□□□□ 0.77
Sirpb1aA0A0A6YYP6 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.86■□□□□ 0.77
Sirpb1aA0A0A6YYP6 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.86■□□□□ 0.77
Sirpb1aA0A0A6YYP6 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sirpb1aA0A0A6YYP6 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Sirpb1aA0A0A6YYP6 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sirpb1aA0A0A6YYP6 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.86■□□□□ 0.77
Sirpb1aA0A0A6YYP6 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.85■□□□□ 0.77
Sirpb1aA0A0A6YYP6 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sirpb1aA0A0A6YYP6 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sirpb1aA0A0A6YYP6 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.85■□□□□ 0.77
Sirpb1aA0A0A6YYP6 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sirpb1aA0A0A6YYP6 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sirpb1aA0A0A6YYP6 Gm6311-201ENSMUST00000073790 878 ntBASIC19.85■□□□□ 0.77
Sirpb1aA0A0A6YYP6 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sirpb1aA0A0A6YYP6 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sirpb1aA0A0A6YYP6 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sirpb1aA0A0A6YYP6 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sirpb1aA0A0A6YYP6 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sirpb1aA0A0A6YYP6 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sirpb1aA0A0A6YYP6 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sirpb1aA0A0A6YYP6 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sirpb1aA0A0A6YYP6 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Sirpb1aA0A0A6YYP6 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Sirpb1aA0A0A6YYP6 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sirpb1aA0A0A6YYP6 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.84■□□□□ 0.77
Sirpb1aA0A0A6YYP6 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Sirpb1aA0A0A6YYP6 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sirpb1aA0A0A6YYP6 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sirpb1aA0A0A6YYP6 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.84■□□□□ 0.77
Sirpb1aA0A0A6YYP6 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sirpb1aA0A0A6YYP6 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sirpb1aA0A0A6YYP6 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sirpb1aA0A0A6YYP6 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sirpb1aA0A0A6YYP6 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sirpb1aA0A0A6YYP6 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Sirpb1aA0A0A6YYP6 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sirpb1aA0A0A6YYP6 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sirpb1aA0A0A6YYP6 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sirpb1aA0A0A6YYP6 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sirpb1aA0A0A6YYP6 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sirpb1aA0A0A6YYP6 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sirpb1aA0A0A6YYP6 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sirpb1aA0A0A6YYP6 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.82■□□□□ 0.76
Sirpb1aA0A0A6YYP6 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sirpb1aA0A0A6YYP6 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sirpb1aA0A0A6YYP6 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sirpb1aA0A0A6YYP6 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Sirpb1aA0A0A6YYP6 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sirpb1aA0A0A6YYP6 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.81■□□□□ 0.76
Sirpb1aA0A0A6YYP6 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sirpb1aA0A0A6YYP6 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sirpb1aA0A0A6YYP6 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sirpb1aA0A0A6YYP6 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Sirpb1aA0A0A6YYP6 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Sirpb1aA0A0A6YYP6 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sirpb1aA0A0A6YYP6 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Sirpb1aA0A0A6YYP6 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sirpb1aA0A0A6YYP6 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Sirpb1aA0A0A6YYP6 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sirpb1aA0A0A6YYP6 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sirpb1aA0A0A6YYP6 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sirpb1aA0A0A6YYP6 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sirpb1aA0A0A6YYP6 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sirpb1aA0A0A6YYP6 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sirpb1aA0A0A6YYP6 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sirpb1aA0A0A6YYP6 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sirpb1aA0A0A6YYP6 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Sirpb1aA0A0A6YYP6 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sirpb1aA0A0A6YYP6 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Sirpb1aA0A0A6YYP6 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.78■□□□□ 0.76
Sirpb1aA0A0A6YYP6 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sirpb1aA0A0A6YYP6 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sirpb1aA0A0A6YYP6 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sirpb1aA0A0A6YYP6 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sirpb1aA0A0A6YYP6 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sirpb1aA0A0A6YYP6 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sirpb1aA0A0A6YYP6 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sirpb1aA0A0A6YYP6 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.77■□□□□ 0.76
Sirpb1aA0A0A6YYP6 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 137.4 ms