Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6n-6A0A075B6B2 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav6n-6A0A075B6B2 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6n-6A0A075B6B2 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trav6n-6A0A075B6B2 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC15.54■□□□□ 0.08
Trav6n-6A0A075B6B2 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6n-6A0A075B6B2 Golph3-202ENSMUST00000226517 2359 ntBASIC15.54■□□□□ 0.08
Trav6n-6A0A075B6B2 Gm11175-201ENSMUST00000116172 543 ntBASIC15.54■□□□□ 0.08
Trav6n-6A0A075B6B2 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC15.54■□□□□ 0.08
Trav6n-6A0A075B6B2 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trav6n-6A0A075B6B2 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6n-6A0A075B6B2 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav6n-6A0A075B6B2 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
Trav6n-6A0A075B6B2 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trav6n-6A0A075B6B2 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6n-6A0A075B6B2 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC15.53■□□□□ 0.08
Trav6n-6A0A075B6B2 Gm44428-201ENSMUST00000204474 874 ntBASIC15.53■□□□□ 0.08
Trav6n-6A0A075B6B2 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC15.53■□□□□ 0.08
Trav6n-6A0A075B6B2 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Trav6n-6A0A075B6B2 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6n-6A0A075B6B2 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6n-6A0A075B6B2 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC15.52■□□□□ 0.08
Trav6n-6A0A075B6B2 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6n-6A0A075B6B2 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6n-6A0A075B6B2 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6n-6A0A075B6B2 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6n-6A0A075B6B2 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6n-6A0A075B6B2 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6n-6A0A075B6B2 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6n-6A0A075B6B2 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6n-6A0A075B6B2 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6n-6A0A075B6B2 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC15.52■□□□□ 0.08
Trav6n-6A0A075B6B2 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav6n-6A0A075B6B2 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav6n-6A0A075B6B2 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6n-6A0A075B6B2 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6n-6A0A075B6B2 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6n-6A0A075B6B2 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC15.51■□□□□ 0.07
Trav6n-6A0A075B6B2 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6n-6A0A075B6B2 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6n-6A0A075B6B2 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Trav6n-6A0A075B6B2 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Trav6n-6A0A075B6B2 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6n-6A0A075B6B2 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6n-6A0A075B6B2 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6n-6A0A075B6B2 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6n-6A0A075B6B2 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC15.5■□□□□ 0.07
Trav6n-6A0A075B6B2 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6n-6A0A075B6B2 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trav6n-6A0A075B6B2 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6n-6A0A075B6B2 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6n-6A0A075B6B2 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6n-6A0A075B6B2 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC15.49■□□□□ 0.07
Trav6n-6A0A075B6B2 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC15.49■□□□□ 0.07
Trav6n-6A0A075B6B2 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC15.49■□□□□ 0.07
Trav6n-6A0A075B6B2 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6n-6A0A075B6B2 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trav6n-6A0A075B6B2 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trav6n-6A0A075B6B2 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6n-6A0A075B6B2 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6n-6A0A075B6B2 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6n-6A0A075B6B2 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6n-6A0A075B6B2 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6n-6A0A075B6B2 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6n-6A0A075B6B2 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6n-6A0A075B6B2 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6n-6A0A075B6B2 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC15.47■□□□□ 0.07
Trav6n-6A0A075B6B2 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6n-6A0A075B6B2 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6n-6A0A075B6B2 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6n-6A0A075B6B2 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6n-6A0A075B6B2 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.46■□□□□ 0.07
Trav6n-6A0A075B6B2 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC15.46■□□□□ 0.07
Trav6n-6A0A075B6B2 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6n-6A0A075B6B2 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6n-6A0A075B6B2 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC15.46■□□□□ 0.06
Trav6n-6A0A075B6B2 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav6n-6A0A075B6B2 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav6n-6A0A075B6B2 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav6n-6A0A075B6B2 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav6n-6A0A075B6B2 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Trav6n-6A0A075B6B2 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6n-6A0A075B6B2 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6n-6A0A075B6B2 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6n-6A0A075B6B2 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6n-6A0A075B6B2 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6n-6A0A075B6B2 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6n-6A0A075B6B2 AC115037.1-201ENSMUST00000223391 2173 ntBASIC15.44■□□□□ 0.06
Trav6n-6A0A075B6B2 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6n-6A0A075B6B2 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Trav6n-6A0A075B6B2 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC15.44■□□□□ 0.06
Trav6n-6A0A075B6B2 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6n-6A0A075B6B2 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6n-6A0A075B6B2 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6n-6A0A075B6B2 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6n-6A0A075B6B2 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC15.43■□□□□ 0.06
Trav6n-6A0A075B6B2 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6n-6A0A075B6B2 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC15.43■□□□□ 0.06
Trav6n-6A0A075B6B2 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC15.43■□□□□ 0.06
Trav6n-6A0A075B6B2 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms