Protein–RNA interactions for Protein: A0A075B6A6

Trav6n-7, T cell receptor alpha variable 6N-7 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-7A0A075B6A6 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav6n-7A0A075B6A6 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav6n-7A0A075B6A6 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav6n-7A0A075B6A6 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trav6n-7A0A075B6A6 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Trav6n-7A0A075B6A6 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trav6n-7A0A075B6A6 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav6n-7A0A075B6A6 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav6n-7A0A075B6A6 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav6n-7A0A075B6A6 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav6n-7A0A075B6A6 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav6n-7A0A075B6A6 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Trav6n-7A0A075B6A6 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
Trav6n-7A0A075B6A6 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.87■□□□□ 0.45
Trav6n-7A0A075B6A6 Gm15820-201ENSMUST00000201566 728 ntBASIC17.87■□□□□ 0.45
Trav6n-7A0A075B6A6 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav6n-7A0A075B6A6 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Trav6n-7A0A075B6A6 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Trav6n-7A0A075B6A6 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav6n-7A0A075B6A6 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.86■□□□□ 0.45
Trav6n-7A0A075B6A6 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav6n-7A0A075B6A6 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav6n-7A0A075B6A6 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Trav6n-7A0A075B6A6 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav6n-7A0A075B6A6 Gm15546-201ENSMUST00000122095 826 ntBASIC17.86■□□□□ 0.45
Trav6n-7A0A075B6A6 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.86■□□□□ 0.45
Trav6n-7A0A075B6A6 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav6n-7A0A075B6A6 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav6n-7A0A075B6A6 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav6n-7A0A075B6A6 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
Trav6n-7A0A075B6A6 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.85■□□□□ 0.45
Trav6n-7A0A075B6A6 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav6n-7A0A075B6A6 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav6n-7A0A075B6A6 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav6n-7A0A075B6A6 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Trav6n-7A0A075B6A6 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav6n-7A0A075B6A6 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC17.85■□□□□ 0.45
Trav6n-7A0A075B6A6 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav6n-7A0A075B6A6 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Trav6n-7A0A075B6A6 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav6n-7A0A075B6A6 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav6n-7A0A075B6A6 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.85■□□□□ 0.45
Trav6n-7A0A075B6A6 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trav6n-7A0A075B6A6 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav6n-7A0A075B6A6 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav6n-7A0A075B6A6 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav6n-7A0A075B6A6 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav6n-7A0A075B6A6 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav6n-7A0A075B6A6 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.84■□□□□ 0.45
Trav6n-7A0A075B6A6 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav6n-7A0A075B6A6 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Trav6n-7A0A075B6A6 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav6n-7A0A075B6A6 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav6n-7A0A075B6A6 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Trav6n-7A0A075B6A6 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav6n-7A0A075B6A6 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.83■□□□□ 0.44
Trav6n-7A0A075B6A6 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.83■□□□□ 0.44
Trav6n-7A0A075B6A6 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav6n-7A0A075B6A6 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav6n-7A0A075B6A6 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav6n-7A0A075B6A6 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Trav6n-7A0A075B6A6 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav6n-7A0A075B6A6 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav6n-7A0A075B6A6 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav6n-7A0A075B6A6 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav6n-7A0A075B6A6 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav6n-7A0A075B6A6 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav6n-7A0A075B6A6 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.81■□□□□ 0.44
Trav6n-7A0A075B6A6 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav6n-7A0A075B6A6 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav6n-7A0A075B6A6 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav6n-7A0A075B6A6 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.81■□□□□ 0.44
Trav6n-7A0A075B6A6 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Trav6n-7A0A075B6A6 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav6n-7A0A075B6A6 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav6n-7A0A075B6A6 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Trav6n-7A0A075B6A6 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
Trav6n-7A0A075B6A6 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav6n-7A0A075B6A6 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Trav6n-7A0A075B6A6 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav6n-7A0A075B6A6 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Trav6n-7A0A075B6A6 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav6n-7A0A075B6A6 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav6n-7A0A075B6A6 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.79■□□□□ 0.44
Trav6n-7A0A075B6A6 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.79■□□□□ 0.44
Trav6n-7A0A075B6A6 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Trav6n-7A0A075B6A6 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav6n-7A0A075B6A6 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
Trav6n-7A0A075B6A6 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav6n-7A0A075B6A6 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav6n-7A0A075B6A6 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav6n-7A0A075B6A6 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.78■□□□□ 0.44
Trav6n-7A0A075B6A6 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav6n-7A0A075B6A6 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.78■□□□□ 0.44
Trav6n-7A0A075B6A6 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.78■□□□□ 0.44
Trav6n-7A0A075B6A6 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav6n-7A0A075B6A6 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav6n-7A0A075B6A6 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.78■□□□□ 0.44
Trav6n-7A0A075B6A6 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Trav6n-7A0A075B6A6 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms