Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Gm5786-201ENSMUST00000085368 882 ntBASIC17.5■□□□□ 0.39
Trav5-4A0A075B652 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav5-4A0A075B652 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav5-4A0A075B652 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav5-4A0A075B652 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Trav5-4A0A075B652 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.49■□□□□ 0.39
Trav5-4A0A075B652 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav5-4A0A075B652 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav5-4A0A075B652 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav5-4A0A075B652 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.49■□□□□ 0.39
Trav5-4A0A075B652 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav5-4A0A075B652 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav5-4A0A075B652 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.49■□□□□ 0.39
Trav5-4A0A075B652 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Trav5-4A0A075B652 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav5-4A0A075B652 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Trav5-4A0A075B652 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Trav5-4A0A075B652 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav5-4A0A075B652 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Trav5-4A0A075B652 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.48■□□□□ 0.39
Trav5-4A0A075B652 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav5-4A0A075B652 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.48■□□□□ 0.39
Trav5-4A0A075B652 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav5-4A0A075B652 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav5-4A0A075B652 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav5-4A0A075B652 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav5-4A0A075B652 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav5-4A0A075B652 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.47■□□□□ 0.39
Trav5-4A0A075B652 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav5-4A0A075B652 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav5-4A0A075B652 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav5-4A0A075B652 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav5-4A0A075B652 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav5-4A0A075B652 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Trav5-4A0A075B652 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav5-4A0A075B652 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav5-4A0A075B652 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trav5-4A0A075B652 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.46■□□□□ 0.39
Trav5-4A0A075B652 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav5-4A0A075B652 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trav5-4A0A075B652 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Trav5-4A0A075B652 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav5-4A0A075B652 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav5-4A0A075B652 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Trav5-4A0A075B652 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav5-4A0A075B652 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav5-4A0A075B652 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.45■□□□□ 0.38
Trav5-4A0A075B652 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav5-4A0A075B652 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Trav5-4A0A075B652 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav5-4A0A075B652 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav5-4A0A075B652 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav5-4A0A075B652 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav5-4A0A075B652 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC17.44■□□□□ 0.38
Trav5-4A0A075B652 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav5-4A0A075B652 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav5-4A0A075B652 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav5-4A0A075B652 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.44■□□□□ 0.38
Trav5-4A0A075B652 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav5-4A0A075B652 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav5-4A0A075B652 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.43■□□□□ 0.38
Trav5-4A0A075B652 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav5-4A0A075B652 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav5-4A0A075B652 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.43■□□□□ 0.38
Trav5-4A0A075B652 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav5-4A0A075B652 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.43■□□□□ 0.38
Trav5-4A0A075B652 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav5-4A0A075B652 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav5-4A0A075B652 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.43■□□□□ 0.38
Trav5-4A0A075B652 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Trav5-4A0A075B652 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav5-4A0A075B652 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav5-4A0A075B652 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav5-4A0A075B652 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav5-4A0A075B652 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav5-4A0A075B652 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav5-4A0A075B652 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Trav5-4A0A075B652 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.41■□□□□ 0.38
Trav5-4A0A075B652 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav5-4A0A075B652 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav5-4A0A075B652 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.41■□□□□ 0.38
Trav5-4A0A075B652 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.41■□□□□ 0.38
Trav5-4A0A075B652 Gm10420-201ENSMUST00000121713 882 ntBASIC17.41■□□□□ 0.38
Trav5-4A0A075B652 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav5-4A0A075B652 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav5-4A0A075B652 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav5-4A0A075B652 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav5-4A0A075B652 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav5-4A0A075B652 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav5-4A0A075B652 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav5-4A0A075B652 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav5-4A0A075B652 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.4■□□□□ 0.38
Trav5-4A0A075B652 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav5-4A0A075B652 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav5-4A0A075B652 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav5-4A0A075B652 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav5-4A0A075B652 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
Trav5-4A0A075B652 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trav5-4A0A075B652 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav5-4A0A075B652 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms