Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Trav4-4-dv10A0A075B651 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC16.41■□□□□ 0.22
Trav4-4-dv10A0A075B651 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav4-4-dv10A0A075B651 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav4-4-dv10A0A075B651 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav4-4-dv10A0A075B651 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav4-4-dv10A0A075B651 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Trav4-4-dv10A0A075B651 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC16.4■□□□□ 0.22
Trav4-4-dv10A0A075B651 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav4-4-dv10A0A075B651 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav4-4-dv10A0A075B651 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav4-4-dv10A0A075B651 Notumos-201ENSMUST00000151998 2659 ntBASIC16.39■□□□□ 0.21
Trav4-4-dv10A0A075B651 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav4-4-dv10A0A075B651 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC16.39■□□□□ 0.21
Trav4-4-dv10A0A075B651 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav4-4-dv10A0A075B651 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav4-4-dv10A0A075B651 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav4-4-dv10A0A075B651 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav4-4-dv10A0A075B651 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav4-4-dv10A0A075B651 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Trav4-4-dv10A0A075B651 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav4-4-dv10A0A075B651 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav4-4-dv10A0A075B651 Gm44949-201ENSMUST00000206423 1450 ntBASIC16.38■□□□□ 0.21
Trav4-4-dv10A0A075B651 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav4-4-dv10A0A075B651 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Trav4-4-dv10A0A075B651 Gm5987-201ENSMUST00000196433 1151 ntBASIC16.38■□□□□ 0.21
Trav4-4-dv10A0A075B651 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav4-4-dv10A0A075B651 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav4-4-dv10A0A075B651 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
Trav4-4-dv10A0A075B651 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav4-4-dv10A0A075B651 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav4-4-dv10A0A075B651 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav4-4-dv10A0A075B651 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav4-4-dv10A0A075B651 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav4-4-dv10A0A075B651 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav4-4-dv10A0A075B651 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Trav4-4-dv10A0A075B651 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav4-4-dv10A0A075B651 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.36■□□□□ 0.21
Trav4-4-dv10A0A075B651 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav4-4-dv10A0A075B651 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC16.36■□□□□ 0.21
Trav4-4-dv10A0A075B651 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC16.36■□□□□ 0.21
Trav4-4-dv10A0A075B651 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
Trav4-4-dv10A0A075B651 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav4-4-dv10A0A075B651 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Trav4-4-dv10A0A075B651 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav4-4-dv10A0A075B651 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav4-4-dv10A0A075B651 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav4-4-dv10A0A075B651 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav4-4-dv10A0A075B651 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav4-4-dv10A0A075B651 Gm9806-201ENSMUST00000051080 552 ntBASIC16.35■□□□□ 0.21
Trav4-4-dv10A0A075B651 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav4-4-dv10A0A075B651 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav4-4-dv10A0A075B651 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav4-4-dv10A0A075B651 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav4-4-dv10A0A075B651 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav4-4-dv10A0A075B651 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav4-4-dv10A0A075B651 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Trav4-4-dv10A0A075B651 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC16.34■□□□□ 0.21
Trav4-4-dv10A0A075B651 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC16.34■□□□□ 0.21
Trav4-4-dv10A0A075B651 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav4-4-dv10A0A075B651 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav4-4-dv10A0A075B651 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav4-4-dv10A0A075B651 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.34■□□□□ 0.21
Trav4-4-dv10A0A075B651 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav4-4-dv10A0A075B651 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav4-4-dv10A0A075B651 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav4-4-dv10A0A075B651 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trav4-4-dv10A0A075B651 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav4-4-dv10A0A075B651 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC16.33■□□□□ 0.2
Trav4-4-dv10A0A075B651 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav4-4-dv10A0A075B651 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav4-4-dv10A0A075B651 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav4-4-dv10A0A075B651 Nsd1-206ENSMUST00000224918 1001 ntBASIC16.32■□□□□ 0.2
Trav4-4-dv10A0A075B651 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav4-4-dv10A0A075B651 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav4-4-dv10A0A075B651 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.32■□□□□ 0.2
Trav4-4-dv10A0A075B651 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav4-4-dv10A0A075B651 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav4-4-dv10A0A075B651 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav4-4-dv10A0A075B651 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav4-4-dv10A0A075B651 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trav4-4-dv10A0A075B651 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav4-4-dv10A0A075B651 Scarna2-201ENSMUST00000157560 414 ntBASIC16.31■□□□□ 0.2
Trav4-4-dv10A0A075B651 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav4-4-dv10A0A075B651 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav4-4-dv10A0A075B651 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav4-4-dv10A0A075B651 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav4-4-dv10A0A075B651 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trav4-4-dv10A0A075B651 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav4-4-dv10A0A075B651 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav4-4-dv10A0A075B651 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav4-4-dv10A0A075B651 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav4-4-dv10A0A075B651 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Trav4-4-dv10A0A075B651 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav4-4-dv10A0A075B651 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trav4-4-dv10A0A075B651 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav4-4-dv10A0A075B651 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trav4-4-dv10A0A075B651 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav4-4-dv10A0A075B651 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav4-4-dv10A0A075B651 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms