Protein–RNA interactions for Protein: T1NXB5

Vstm4, V-set and transmembrane domain-containing protein 4, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vstm4T1NXB5 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vstm4T1NXB5 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vstm4T1NXB5 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.73□□□□□ -0.21
Vstm4T1NXB5 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vstm4T1NXB5 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vstm4T1NXB5 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vstm4T1NXB5 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vstm4T1NXB5 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.73□□□□□ -0.21
Vstm4T1NXB5 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vstm4T1NXB5 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vstm4T1NXB5 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vstm4T1NXB5 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Vstm4T1NXB5 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vstm4T1NXB5 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.73□□□□□ -0.21
Vstm4T1NXB5 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vstm4T1NXB5 Gm18473-201ENSMUST00000220543 868 ntBASIC13.73□□□□□ -0.21
Vstm4T1NXB5 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vstm4T1NXB5 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vstm4T1NXB5 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.73□□□□□ -0.21
Vstm4T1NXB5 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vstm4T1NXB5 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vstm4T1NXB5 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vstm4T1NXB5 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Vstm4T1NXB5 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vstm4T1NXB5 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vstm4T1NXB5 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.73□□□□□ -0.21
Vstm4T1NXB5 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vstm4T1NXB5 Arhgef3-204ENSMUST00000225949 3198 ntBASIC13.73□□□□□ -0.21
Vstm4T1NXB5 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vstm4T1NXB5 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Vstm4T1NXB5 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vstm4T1NXB5 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC13.72□□□□□ -0.21
Vstm4T1NXB5 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vstm4T1NXB5 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vstm4T1NXB5 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.72□□□□□ -0.21
Vstm4T1NXB5 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vstm4T1NXB5 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vstm4T1NXB5 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC13.72□□□□□ -0.21
Vstm4T1NXB5 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vstm4T1NXB5 Gm43174-201ENSMUST00000195914 2445 ntBASIC13.72□□□□□ -0.21
Vstm4T1NXB5 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vstm4T1NXB5 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vstm4T1NXB5 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vstm4T1NXB5 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vstm4T1NXB5 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vstm4T1NXB5 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vstm4T1NXB5 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vstm4T1NXB5 Gm14921-201ENSMUST00000118643 908 ntBASIC13.72□□□□□ -0.21
Vstm4T1NXB5 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Vstm4T1NXB5 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Vstm4T1NXB5 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Vstm4T1NXB5 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.72□□□□□ -0.21
Vstm4T1NXB5 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.72□□□□□ -0.21
Vstm4T1NXB5 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vstm4T1NXB5 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vstm4T1NXB5 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vstm4T1NXB5 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.72□□□□□ -0.21
Vstm4T1NXB5 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.72□□□□□ -0.21
Vstm4T1NXB5 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Vstm4T1NXB5 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.72□□□□□ -0.21
Vstm4T1NXB5 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.72□□□□□ -0.21
Vstm4T1NXB5 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vstm4T1NXB5 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vstm4T1NXB5 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vstm4T1NXB5 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vstm4T1NXB5 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Vstm4T1NXB5 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vstm4T1NXB5 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vstm4T1NXB5 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vstm4T1NXB5 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Vstm4T1NXB5 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vstm4T1NXB5 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vstm4T1NXB5 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vstm4T1NXB5 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vstm4T1NXB5 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vstm4T1NXB5 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vstm4T1NXB5 AC154517.2-201ENSMUST00000220829 2458 ntBASIC13.71□□□□□ -0.21
Vstm4T1NXB5 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vstm4T1NXB5 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Vstm4T1NXB5 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vstm4T1NXB5 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vstm4T1NXB5 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vstm4T1NXB5 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vstm4T1NXB5 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Vstm4T1NXB5 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vstm4T1NXB5 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vstm4T1NXB5 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.71□□□□□ -0.21
Vstm4T1NXB5 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vstm4T1NXB5 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vstm4T1NXB5 Gm14704-201ENSMUST00000120300 874 ntBASIC13.71□□□□□ -0.21
Vstm4T1NXB5 Gm16215-201ENSMUST00000161990 637 ntBASIC13.71□□□□□ -0.21
Vstm4T1NXB5 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vstm4T1NXB5 Gm28631-201ENSMUST00000190740 334 ntBASIC13.71□□□□□ -0.21
Vstm4T1NXB5 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.71□□□□□ -0.21
Vstm4T1NXB5 Gm8227-201ENSMUST00000223306 571 ntBASIC13.71□□□□□ -0.21
Vstm4T1NXB5 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.71□□□□□ -0.21
Vstm4T1NXB5 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.71□□□□□ -0.21
Vstm4T1NXB5 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vstm4T1NXB5 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.71□□□□□ -0.21
Vstm4T1NXB5 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 107.3 ms