Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
PdfS4R2K0 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
PdfS4R2K0 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
PdfS4R2K0 Gm42863-201ENSMUST00000197875 2958 ntBASIC9.78□□□□□ -0.84
PdfS4R2K0 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC9.78□□□□□ -0.84
PdfS4R2K0 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
PdfS4R2K0 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
PdfS4R2K0 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
PdfS4R2K0 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
PdfS4R2K0 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
PdfS4R2K0 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.84
PdfS4R2K0 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.84
PdfS4R2K0 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
PdfS4R2K0 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
PdfS4R2K0 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
PdfS4R2K0 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
PdfS4R2K0 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
PdfS4R2K0 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
PdfS4R2K0 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC9.77□□□□□ -0.85
PdfS4R2K0 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC9.77□□□□□ -0.85
PdfS4R2K0 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC9.77□□□□□ -0.85
PdfS4R2K0 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
PdfS4R2K0 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
PdfS4R2K0 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
PdfS4R2K0 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
PdfS4R2K0 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC9.77□□□□□ -0.85
PdfS4R2K0 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
PdfS4R2K0 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
PdfS4R2K0 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
PdfS4R2K0 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC9.77□□□□□ -0.85
PdfS4R2K0 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC9.77□□□□□ -0.85
PdfS4R2K0 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC9.77□□□□□ -0.85
PdfS4R2K0 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
PdfS4R2K0 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC9.77□□□□□ -0.85
PdfS4R2K0 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC9.77□□□□□ -0.85
PdfS4R2K0 Gm5626-201ENSMUST00000222151 1058 ntBASIC9.77□□□□□ -0.85
PdfS4R2K0 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
PdfS4R2K0 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
PdfS4R2K0 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
PdfS4R2K0 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
PdfS4R2K0 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC9.77□□□□□ -0.85
PdfS4R2K0 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
PdfS4R2K0 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
PdfS4R2K0 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
PdfS4R2K0 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
PdfS4R2K0 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.85
PdfS4R2K0 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC9.77□□□□□ -0.85
PdfS4R2K0 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
PdfS4R2K0 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
PdfS4R2K0 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
PdfS4R2K0 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
PdfS4R2K0 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC9.77□□□□□ -0.85
PdfS4R2K0 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
PdfS4R2K0 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
PdfS4R2K0 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC9.76□□□□□ -0.85
PdfS4R2K0 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
PdfS4R2K0 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC9.76□□□□□ -0.85
PdfS4R2K0 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
PdfS4R2K0 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
PdfS4R2K0 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
PdfS4R2K0 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
PdfS4R2K0 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
PdfS4R2K0 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
PdfS4R2K0 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
PdfS4R2K0 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
PdfS4R2K0 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
PdfS4R2K0 Gm15460-201ENSMUST00000118147 391 ntBASIC9.76□□□□□ -0.85
PdfS4R2K0 Gm4875-201ENSMUST00000118257 786 ntBASIC9.76□□□□□ -0.85
PdfS4R2K0 Gm15487-201ENSMUST00000122373 465 ntBASIC9.76□□□□□ -0.85
PdfS4R2K0 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
PdfS4R2K0 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
PdfS4R2K0 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
PdfS4R2K0 Mir7221-201ENSMUST00000184009 72 ntBASIC9.76□□□□□ -0.85
PdfS4R2K0 Ighv5-13-201ENSMUST00000193550 290 ntBASIC9.76□□□□□ -0.85
PdfS4R2K0 Gm43703-201ENSMUST00000200523 763 ntBASIC9.76□□□□□ -0.85
PdfS4R2K0 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC9.76□□□□□ -0.85
PdfS4R2K0 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
PdfS4R2K0 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
PdfS4R2K0 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
PdfS4R2K0 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
PdfS4R2K0 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
PdfS4R2K0 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
PdfS4R2K0 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
PdfS4R2K0 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
PdfS4R2K0 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
PdfS4R2K0 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
PdfS4R2K0 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
PdfS4R2K0 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
PdfS4R2K0 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
PdfS4R2K0 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
PdfS4R2K0 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
PdfS4R2K0 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
PdfS4R2K0 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
PdfS4R2K0 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
PdfS4R2K0 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
PdfS4R2K0 AC166574.4-201ENSMUST00000227165 1937 ntBASIC9.76□□□□□ -0.85
PdfS4R2K0 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
PdfS4R2K0 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
PdfS4R2K0 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
PdfS4R2K0 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms