Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mrpl40Q9Z2Q5 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.76□□□□□ -0.37
Mrpl40Q9Z2Q5 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Mrpl40Q9Z2Q5 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Mrpl40Q9Z2Q5 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Mrpl40Q9Z2Q5 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mrpl40Q9Z2Q5 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mrpl40Q9Z2Q5 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mrpl40Q9Z2Q5 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mrpl40Q9Z2Q5 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Mrpl40Q9Z2Q5 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.76□□□□□ -0.37
Mrpl40Q9Z2Q5 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
Mrpl40Q9Z2Q5 Gm7029-201ENSMUST00000173226 450 ntBASIC12.76□□□□□ -0.37
Mrpl40Q9Z2Q5 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.76□□□□□ -0.37
Mrpl40Q9Z2Q5 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.76□□□□□ -0.37
Mrpl40Q9Z2Q5 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Mrpl40Q9Z2Q5 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.76□□□□□ -0.37
Mrpl40Q9Z2Q5 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mrpl40Q9Z2Q5 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mrpl40Q9Z2Q5 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mrpl40Q9Z2Q5 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mrpl40Q9Z2Q5 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mrpl40Q9Z2Q5 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mrpl40Q9Z2Q5 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mrpl40Q9Z2Q5 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Mrpl40Q9Z2Q5 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mrpl40Q9Z2Q5 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mrpl40Q9Z2Q5 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Mrpl40Q9Z2Q5 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.76□□□□□ -0.37
Mrpl40Q9Z2Q5 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mrpl40Q9Z2Q5 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mrpl40Q9Z2Q5 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mrpl40Q9Z2Q5 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mrpl40Q9Z2Q5 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mrpl40Q9Z2Q5 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mrpl40Q9Z2Q5 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Mrpl40Q9Z2Q5 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mrpl40Q9Z2Q5 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mrpl40Q9Z2Q5 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mrpl40Q9Z2Q5 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mrpl40Q9Z2Q5 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mrpl40Q9Z2Q5 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mrpl40Q9Z2Q5 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mrpl40Q9Z2Q5 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mrpl40Q9Z2Q5 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.75□□□□□ -0.37
Mrpl40Q9Z2Q5 Gm6447-201ENSMUST00000118905 835 ntBASIC12.75□□□□□ -0.37
Mrpl40Q9Z2Q5 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.75□□□□□ -0.37
Mrpl40Q9Z2Q5 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Mrpl40Q9Z2Q5 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.75□□□□□ -0.37
Mrpl40Q9Z2Q5 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Mrpl40Q9Z2Q5 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.75□□□□□ -0.37
Mrpl40Q9Z2Q5 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Mrpl40Q9Z2Q5 Gm26927-201ENSMUST00000182385 965 ntBASIC12.75□□□□□ -0.37
Mrpl40Q9Z2Q5 Gm27501-201ENSMUST00000183599 107 ntBASIC12.75□□□□□ -0.37
Mrpl40Q9Z2Q5 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Mrpl40Q9Z2Q5 Gm42627-201ENSMUST00000197347 224 ntBASIC12.75□□□□□ -0.37
Mrpl40Q9Z2Q5 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.75□□□□□ -0.37
Mrpl40Q9Z2Q5 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mrpl40Q9Z2Q5 Gm44069-201ENSMUST00000204898 506 ntBASIC12.75□□□□□ -0.37
Mrpl40Q9Z2Q5 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.75□□□□□ -0.37
Mrpl40Q9Z2Q5 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.75□□□□□ -0.37
Mrpl40Q9Z2Q5 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.75□□□□□ -0.37
Mrpl40Q9Z2Q5 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.75□□□□□ -0.37
Mrpl40Q9Z2Q5 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Mrpl40Q9Z2Q5 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mrpl40Q9Z2Q5 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mrpl40Q9Z2Q5 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mrpl40Q9Z2Q5 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mrpl40Q9Z2Q5 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mrpl40Q9Z2Q5 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Mrpl40Q9Z2Q5 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mrpl40Q9Z2Q5 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Mrpl40Q9Z2Q5 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mrpl40Q9Z2Q5 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Mrpl40Q9Z2Q5 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mrpl40Q9Z2Q5 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Mrpl40Q9Z2Q5 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.75□□□□□ -0.37
Mrpl40Q9Z2Q5 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Mrpl40Q9Z2Q5 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl40Q9Z2Q5 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Mrpl40Q9Z2Q5 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl40Q9Z2Q5 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl40Q9Z2Q5 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl40Q9Z2Q5 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl40Q9Z2Q5 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl40Q9Z2Q5 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl40Q9Z2Q5 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl40Q9Z2Q5 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Mrpl40Q9Z2Q5 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl40Q9Z2Q5 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl40Q9Z2Q5 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl40Q9Z2Q5 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl40Q9Z2Q5 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Mrpl40Q9Z2Q5 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.74□□□□□ -0.37
Mrpl40Q9Z2Q5 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl40Q9Z2Q5 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl40Q9Z2Q5 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Mrpl40Q9Z2Q5 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Mrpl40Q9Z2Q5 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.74□□□□□ -0.37
Mrpl40Q9Z2Q5 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 108.1 ms