Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Smarcb1Q9Z0H3 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcb1Q9Z0H3 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcb1Q9Z0H3 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcb1Q9Z0H3 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcb1Q9Z0H3 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcb1Q9Z0H3 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcb1Q9Z0H3 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.17□□□□□ -0.3
Smarcb1Q9Z0H3 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcb1Q9Z0H3 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcb1Q9Z0H3 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Smarcb1Q9Z0H3 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcb1Q9Z0H3 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcb1Q9Z0H3 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcb1Q9Z0H3 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Smarcb1Q9Z0H3 Gm14130-201ENSMUST00000118417 987 ntBASIC13.17□□□□□ -0.3
Smarcb1Q9Z0H3 Gm12012-201ENSMUST00000118857 1066 ntBASIC13.17□□□□□ -0.3
Smarcb1Q9Z0H3 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Smarcb1Q9Z0H3 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcb1Q9Z0H3 Gm28882-201ENSMUST00000185504 314 ntBASIC13.17□□□□□ -0.3
Smarcb1Q9Z0H3 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcb1Q9Z0H3 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.17□□□□□ -0.3
Smarcb1Q9Z0H3 Gm44967-201ENSMUST00000207047 631 ntBASIC13.17□□□□□ -0.3
Smarcb1Q9Z0H3 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Smarcb1Q9Z0H3 AC159747.1-201ENSMUST00000219903 265 ntBASIC13.17□□□□□ -0.3
Smarcb1Q9Z0H3 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcb1Q9Z0H3 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcb1Q9Z0H3 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcb1Q9Z0H3 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcb1Q9Z0H3 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcb1Q9Z0H3 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcb1Q9Z0H3 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcb1Q9Z0H3 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcb1Q9Z0H3 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.17□□□□□ -0.3
Smarcb1Q9Z0H3 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Smarcb1Q9Z0H3 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcb1Q9Z0H3 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcb1Q9Z0H3 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcb1Q9Z0H3 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcb1Q9Z0H3 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcb1Q9Z0H3 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Smarcb1Q9Z0H3 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcb1Q9Z0H3 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Smarcb1Q9Z0H3 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcb1Q9Z0H3 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Smarcb1Q9Z0H3 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcb1Q9Z0H3 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcb1Q9Z0H3 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcb1Q9Z0H3 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC13.16□□□□□ -0.3
Smarcb1Q9Z0H3 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcb1Q9Z0H3 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcb1Q9Z0H3 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcb1Q9Z0H3 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcb1Q9Z0H3 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcb1Q9Z0H3 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcb1Q9Z0H3 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcb1Q9Z0H3 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.16□□□□□ -0.3
Smarcb1Q9Z0H3 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcb1Q9Z0H3 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcb1Q9Z0H3 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcb1Q9Z0H3 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcb1Q9Z0H3 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcb1Q9Z0H3 Gm11597-201ENSMUST00000121423 964 ntBASIC13.16□□□□□ -0.3
Smarcb1Q9Z0H3 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Smarcb1Q9Z0H3 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcb1Q9Z0H3 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcb1Q9Z0H3 Gm2383-201ENSMUST00000181461 807 ntBASIC13.16□□□□□ -0.3
Smarcb1Q9Z0H3 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcb1Q9Z0H3 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.16□□□□□ -0.3
Smarcb1Q9Z0H3 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcb1Q9Z0H3 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC13.16□□□□□ -0.3
Smarcb1Q9Z0H3 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.16□□□□□ -0.3
Smarcb1Q9Z0H3 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcb1Q9Z0H3 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcb1Q9Z0H3 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcb1Q9Z0H3 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcb1Q9Z0H3 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Smarcb1Q9Z0H3 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcb1Q9Z0H3 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcb1Q9Z0H3 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcb1Q9Z0H3 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcb1Q9Z0H3 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcb1Q9Z0H3 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.16□□□□□ -0.3
Smarcb1Q9Z0H3 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcb1Q9Z0H3 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcb1Q9Z0H3 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcb1Q9Z0H3 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.16□□□□□ -0.3
Smarcb1Q9Z0H3 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.16□□□□□ -0.3
Smarcb1Q9Z0H3 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Smarcb1Q9Z0H3 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcb1Q9Z0H3 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcb1Q9Z0H3 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcb1Q9Z0H3 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.15□□□□□ -0.3
Smarcb1Q9Z0H3 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Smarcb1Q9Z0H3 AC123857.2-201ENSMUST00000225756 1582 ntBASIC13.15□□□□□ -0.3
Smarcb1Q9Z0H3 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Smarcb1Q9Z0H3 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcb1Q9Z0H3 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcb1Q9Z0H3 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcb1Q9Z0H3 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms