Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf40aQ9R1C7 Gm16479-201ENSMUST00000121706 932 ntBASIC14.01□□□□□ -0.17
Prpf40aQ9R1C7 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf40aQ9R1C7 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf40aQ9R1C7 Gm26185-201ENSMUST00000157692 266 ntBASIC14.01□□□□□ -0.17
Prpf40aQ9R1C7 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC14.01□□□□□ -0.17
Prpf40aQ9R1C7 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC14.01□□□□□ -0.17
Prpf40aQ9R1C7 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.01□□□□□ -0.17
Prpf40aQ9R1C7 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.01□□□□□ -0.17
Prpf40aQ9R1C7 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.01□□□□□ -0.17
Prpf40aQ9R1C7 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf40aQ9R1C7 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf40aQ9R1C7 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf40aQ9R1C7 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf40aQ9R1C7 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf40aQ9R1C7 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf40aQ9R1C7 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf40aQ9R1C7 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf40aQ9R1C7 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf40aQ9R1C7 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC14.01□□□□□ -0.17
Prpf40aQ9R1C7 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Prpf40aQ9R1C7 Gm14608-201ENSMUST00000120030 1553 ntBASIC14□□□□□ -0.17
Prpf40aQ9R1C7 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC14□□□□□ -0.17
Prpf40aQ9R1C7 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC14□□□□□ -0.17
Prpf40aQ9R1C7 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf40aQ9R1C7 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Prpf40aQ9R1C7 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf40aQ9R1C7 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC14□□□□□ -0.17
Prpf40aQ9R1C7 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf40aQ9R1C7 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf40aQ9R1C7 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC14□□□□□ -0.17
Prpf40aQ9R1C7 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf40aQ9R1C7 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14□□□□□ -0.17
Prpf40aQ9R1C7 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC14□□□□□ -0.17
Prpf40aQ9R1C7 Gm43463-201ENSMUST00000195967 1803 ntBASIC14□□□□□ -0.17
Prpf40aQ9R1C7 Mypopos-202ENSMUST00000205975 2321 ntBASIC14□□□□□ -0.17
Prpf40aQ9R1C7 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf40aQ9R1C7 Gm16177-201ENSMUST00000120728 718 ntBASIC14□□□□□ -0.17
Prpf40aQ9R1C7 Gm26927-201ENSMUST00000182385 965 ntBASIC14□□□□□ -0.17
Prpf40aQ9R1C7 Gm9061-201ENSMUST00000182707 1006 ntBASIC14□□□□□ -0.17
Prpf40aQ9R1C7 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC14□□□□□ -0.17
Prpf40aQ9R1C7 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14□□□□□ -0.17
Prpf40aQ9R1C7 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf40aQ9R1C7 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Prpf40aQ9R1C7 n-R5s77-201ENSMUST00000083757 119 ntBASIC14□□□□□ -0.17
Prpf40aQ9R1C7 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf40aQ9R1C7 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf40aQ9R1C7 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14□□□□□ -0.17
Prpf40aQ9R1C7 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Prpf40aQ9R1C7 Gm44241-201ENSMUST00000203230 1662 ntBASIC14□□□□□ -0.17
Prpf40aQ9R1C7 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf40aQ9R1C7 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf40aQ9R1C7 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf40aQ9R1C7 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf40aQ9R1C7 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf40aQ9R1C7 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf40aQ9R1C7 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Prpf40aQ9R1C7 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf40aQ9R1C7 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.99□□□□□ -0.17
Prpf40aQ9R1C7 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf40aQ9R1C7 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf40aQ9R1C7 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf40aQ9R1C7 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.99□□□□□ -0.17
Prpf40aQ9R1C7 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
Prpf40aQ9R1C7 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.99□□□□□ -0.17
Prpf40aQ9R1C7 Gm12384-201ENSMUST00000119228 919 ntBASIC13.99□□□□□ -0.17
Prpf40aQ9R1C7 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.99□□□□□ -0.17
Prpf40aQ9R1C7 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.99□□□□□ -0.17
Prpf40aQ9R1C7 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.99□□□□□ -0.17
Prpf40aQ9R1C7 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.99□□□□□ -0.17
Prpf40aQ9R1C7 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.99□□□□□ -0.17
Prpf40aQ9R1C7 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Prpf40aQ9R1C7 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.99□□□□□ -0.17
Prpf40aQ9R1C7 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf40aQ9R1C7 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf40aQ9R1C7 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf40aQ9R1C7 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf40aQ9R1C7 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf40aQ9R1C7 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf40aQ9R1C7 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf40aQ9R1C7 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf40aQ9R1C7 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf40aQ9R1C7 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf40aQ9R1C7 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf40aQ9R1C7 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prpf40aQ9R1C7 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Prpf40aQ9R1C7 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prpf40aQ9R1C7 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prpf40aQ9R1C7 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.98□□□□□ -0.17
Prpf40aQ9R1C7 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prpf40aQ9R1C7 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.98□□□□□ -0.17
Prpf40aQ9R1C7 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prpf40aQ9R1C7 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Prpf40aQ9R1C7 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prpf40aQ9R1C7 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prpf40aQ9R1C7 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prpf40aQ9R1C7 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Prpf40aQ9R1C7 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.98□□□□□ -0.17
Prpf40aQ9R1C7 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.98□□□□□ -0.17
Prpf40aQ9R1C7 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms