Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Nubp2Q9R061 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Nubp2Q9R061 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nubp2Q9R061 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nubp2Q9R061 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.32□□□□□ -0.6
Nubp2Q9R061 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nubp2Q9R061 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.32□□□□□ -0.6
Nubp2Q9R061 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nubp2Q9R061 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nubp2Q9R061 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nubp2Q9R061 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nubp2Q9R061 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nubp2Q9R061 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nubp2Q9R061 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.32□□□□□ -0.6
Nubp2Q9R061 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nubp2Q9R061 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nubp2Q9R061 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nubp2Q9R061 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.32□□□□□ -0.6
Nubp2Q9R061 AC131068.2-201ENSMUST00000226175 1453 ntBASIC11.32□□□□□ -0.6
Nubp2Q9R061 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.31□□□□□ -0.6
Nubp2Q9R061 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.31□□□□□ -0.6
Nubp2Q9R061 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nubp2Q9R061 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nubp2Q9R061 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nubp2Q9R061 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.31□□□□□ -0.6
Nubp2Q9R061 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.31□□□□□ -0.6
Nubp2Q9R061 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nubp2Q9R061 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.31□□□□□ -0.6
Nubp2Q9R061 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Nubp2Q9R061 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Nubp2Q9R061 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nubp2Q9R061 Gm12957-201ENSMUST00000117835 377 ntBASIC11.31□□□□□ -0.6
Nubp2Q9R061 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nubp2Q9R061 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.31□□□□□ -0.6
Nubp2Q9R061 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nubp2Q9R061 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.31□□□□□ -0.6
Nubp2Q9R061 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.31□□□□□ -0.6
Nubp2Q9R061 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nubp2Q9R061 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nubp2Q9R061 Gm43630-201ENSMUST00000201550 776 ntBASIC11.31□□□□□ -0.6
Nubp2Q9R061 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.31□□□□□ -0.6
Nubp2Q9R061 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.31□□□□□ -0.6
Nubp2Q9R061 Gm29705-201ENSMUST00000212598 474 ntBASIC11.31□□□□□ -0.6
Nubp2Q9R061 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nubp2Q9R061 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nubp2Q9R061 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nubp2Q9R061 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nubp2Q9R061 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nubp2Q9R061 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Nubp2Q9R061 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nubp2Q9R061 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nubp2Q9R061 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nubp2Q9R061 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nubp2Q9R061 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nubp2Q9R061 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nubp2Q9R061 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nubp2Q9R061 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nubp2Q9R061 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nubp2Q9R061 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Nubp2Q9R061 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nubp2Q9R061 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nubp2Q9R061 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nubp2Q9R061 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nubp2Q9R061 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nubp2Q9R061 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nubp2Q9R061 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.3□□□□□ -0.6
Nubp2Q9R061 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.3□□□□□ -0.6
Nubp2Q9R061 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nubp2Q9R061 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nubp2Q9R061 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nubp2Q9R061 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nubp2Q9R061 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nubp2Q9R061 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.3□□□□□ -0.6
Nubp2Q9R061 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nubp2Q9R061 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nubp2Q9R061 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nubp2Q9R061 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nubp2Q9R061 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nubp2Q9R061 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nubp2Q9R061 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nubp2Q9R061 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Nubp2Q9R061 Gm16177-201ENSMUST00000120728 718 ntBASIC11.3□□□□□ -0.6
Nubp2Q9R061 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.3□□□□□ -0.6
Nubp2Q9R061 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nubp2Q9R061 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.3□□□□□ -0.6
Nubp2Q9R061 Mir1938-201ENSMUST00000158746 100 ntBASIC11.3□□□□□ -0.6
Nubp2Q9R061 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Nubp2Q9R061 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.3□□□□□ -0.6
Nubp2Q9R061 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.3□□□□□ -0.6
Nubp2Q9R061 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.3□□□□□ -0.6
Nubp2Q9R061 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Nubp2Q9R061 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nubp2Q9R061 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.3□□□□□ -0.6
Nubp2Q9R061 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.3□□□□□ -0.6
Nubp2Q9R061 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nubp2Q9R061 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nubp2Q9R061 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.3□□□□□ -0.6
Nubp2Q9R061 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.3□□□□□ -0.6
Nubp2Q9R061 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nubp2Q9R061 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms