Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn11aQ9R053 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn11aQ9R053 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Scn11aQ9R053 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Scn11aQ9R053 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Scn11aQ9R053 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scn11aQ9R053 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn11aQ9R053 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Scn11aQ9R053 Gm9062-201ENSMUST00000117712 727 ntBASIC14.8□□□□□ -0.04
Scn11aQ9R053 Gm11941-201ENSMUST00000119904 610 ntBASIC14.8□□□□□ -0.04
Scn11aQ9R053 Gm14247-201ENSMUST00000120950 237 ntBASIC14.8□□□□□ -0.04
Scn11aQ9R053 Gm15432-201ENSMUST00000121106 195 ntBASIC14.8□□□□□ -0.04
Scn11aQ9R053 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC14.8□□□□□ -0.04
Scn11aQ9R053 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn11aQ9R053 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Scn11aQ9R053 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn11aQ9R053 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.8□□□□□ -0.04
Scn11aQ9R053 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn11aQ9R053 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC14.8□□□□□ -0.04
Scn11aQ9R053 Gm2420-201ENSMUST00000119864 2149 ntBASIC14.8□□□□□ -0.04
Scn11aQ9R053 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn11aQ9R053 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.8□□□□□ -0.04
Scn11aQ9R053 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn11aQ9R053 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn11aQ9R053 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC14.8□□□□□ -0.04
Scn11aQ9R053 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn11aQ9R053 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Scn11aQ9R053 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn11aQ9R053 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn11aQ9R053 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Scn11aQ9R053 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC14.8□□□□□ -0.04
Scn11aQ9R053 Gm7722-201ENSMUST00000120646 741 ntBASIC14.8□□□□□ -0.04
Scn11aQ9R053 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC14.8□□□□□ -0.04
Scn11aQ9R053 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scn11aQ9R053 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC14.8□□□□□ -0.04
Scn11aQ9R053 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Scn11aQ9R053 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC14.8□□□□□ -0.04
Scn11aQ9R053 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC14.8□□□□□ -0.04
Scn11aQ9R053 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Scn11aQ9R053 Gm29155-201ENSMUST00000185910 269 ntBASIC14.8□□□□□ -0.04
Scn11aQ9R053 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC14.8□□□□□ -0.04
Scn11aQ9R053 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scn11aQ9R053 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC14.8□□□□□ -0.04
Scn11aQ9R053 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC14.8□□□□□ -0.04
Scn11aQ9R053 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC14.8□□□□□ -0.04
Scn11aQ9R053 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn11aQ9R053 AC133602.1-201ENSMUST00000227510 509 ntBASIC14.8□□□□□ -0.04
Scn11aQ9R053 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn11aQ9R053 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn11aQ9R053 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Scn11aQ9R053 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Scn11aQ9R053 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn11aQ9R053 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn11aQ9R053 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn11aQ9R053 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn11aQ9R053 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn11aQ9R053 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Scn11aQ9R053 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn11aQ9R053 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn11aQ9R053 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC14.79□□□□□ -0.04
Scn11aQ9R053 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Scn11aQ9R053 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn11aQ9R053 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn11aQ9R053 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn11aQ9R053 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC14.79□□□□□ -0.04
Scn11aQ9R053 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.79□□□□□ -0.04
Scn11aQ9R053 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn11aQ9R053 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn11aQ9R053 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn11aQ9R053 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn11aQ9R053 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn11aQ9R053 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Scn11aQ9R053 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
Scn11aQ9R053 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn11aQ9R053 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Scn11aQ9R053 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Scn11aQ9R053 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn11aQ9R053 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
Scn11aQ9R053 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn11aQ9R053 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn11aQ9R053 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Scn11aQ9R053 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.79□□□□□ -0.04
Scn11aQ9R053 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.79□□□□□ -0.04
Scn11aQ9R053 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn11aQ9R053 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn11aQ9R053 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn11aQ9R053 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Scn11aQ9R053 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn11aQ9R053 Gm22133-201ENSMUST00000102082 109 ntBASIC14.78□□□□□ -0.04
Scn11aQ9R053 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC14.78□□□□□ -0.04
Scn11aQ9R053 Gm11450-201ENSMUST00000121144 333 ntBASIC14.78□□□□□ -0.04
Scn11aQ9R053 Gm25545-201ENSMUST00000122673 323 ntBASIC14.78□□□□□ -0.04
Scn11aQ9R053 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn11aQ9R053 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Scn11aQ9R053 Gm4034-201ENSMUST00000187674 480 ntBASIC14.78□□□□□ -0.04
Scn11aQ9R053 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC14.78□□□□□ -0.04
Scn11aQ9R053 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Scn11aQ9R053 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn11aQ9R053 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Scn11aQ9R053 Gm8325-201ENSMUST00000099086 453 ntBASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms