Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Gm24791-201ENSMUST00000104284 131 ntBASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Gm9507-202ENSMUST00000180157 654 ntBASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Gm11619-201ENSMUST00000117474 237 ntBASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Gm9916-201ENSMUST00000192943 1228 ntBASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Gm45113-201ENSMUST00000207518 165 ntBASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Gm3433-201ENSMUST00000210149 1058 ntBASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Gm18514-201ENSMUST00000218980 436 ntBASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Col4a4Q9QZR9 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a4Q9QZR9 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a4Q9QZR9 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Col4a4Q9QZR9 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a4Q9QZR9 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a4Q9QZR9 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Col4a4Q9QZR9 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.37□□□□□ -0.43
Col4a4Q9QZR9 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a4Q9QZR9 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a4Q9QZR9 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a4Q9QZR9 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC12.37□□□□□ -0.43
Col4a4Q9QZR9 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Col4a4Q9QZR9 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a4Q9QZR9 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a4Q9QZR9 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a4Q9QZR9 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a4Q9QZR9 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Col4a4Q9QZR9 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a4Q9QZR9 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a4Q9QZR9 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a4Q9QZR9 Gm10169-201ENSMUST00000121822 348 ntBASIC12.37□□□□□ -0.43
Col4a4Q9QZR9 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC12.37□□□□□ -0.43
Col4a4Q9QZR9 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a4Q9QZR9 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC12.37□□□□□ -0.43
Col4a4Q9QZR9 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Col4a4Q9QZR9 Gm44953-201ENSMUST00000208745 1286 ntBASIC12.37□□□□□ -0.43
Col4a4Q9QZR9 AC165154.1-201ENSMUST00000226661 340 ntBASIC12.37□□□□□ -0.43
Col4a4Q9QZR9 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Col4a4Q9QZR9 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a4Q9QZR9 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a4Q9QZR9 Sybu-209ENSMUST00000228639 4113 ntBASIC12.37□□□□□ -0.43
Col4a4Q9QZR9 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.37□□□□□ -0.43
Col4a4Q9QZR9 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a4Q9QZR9 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a4Q9QZR9 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a4Q9QZR9 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a4Q9QZR9 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a4Q9QZR9 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col4a4Q9QZR9 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a4Q9QZR9 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col4a4Q9QZR9 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.36□□□□□ -0.43
Col4a4Q9QZR9 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms