Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Upk3aQ9JKX8 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk3aQ9JKX8 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Upk3aQ9JKX8 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Upk3aQ9JKX8 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Upk3aQ9JKX8 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Upk3aQ9JKX8 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Upk3aQ9JKX8 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.21□□□□□ -0.46
Upk3aQ9JKX8 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Upk3aQ9JKX8 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Upk3aQ9JKX8 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Upk3aQ9JKX8 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Upk3aQ9JKX8 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Upk3aQ9JKX8 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Upk3aQ9JKX8 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Upk3aQ9JKX8 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Upk3aQ9JKX8 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Upk3aQ9JKX8 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3aQ9JKX8 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3aQ9JKX8 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3aQ9JKX8 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3aQ9JKX8 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.2□□□□□ -0.46
Upk3aQ9JKX8 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3aQ9JKX8 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.2□□□□□ -0.46
Upk3aQ9JKX8 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.2□□□□□ -0.46
Upk3aQ9JKX8 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3aQ9JKX8 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.2□□□□□ -0.46
Upk3aQ9JKX8 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3aQ9JKX8 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3aQ9JKX8 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3aQ9JKX8 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.2□□□□□ -0.46
Upk3aQ9JKX8 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.2□□□□□ -0.46
Upk3aQ9JKX8 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3aQ9JKX8 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3aQ9JKX8 Mospd4-201ENSMUST00000180618 576 ntBASIC12.2□□□□□ -0.46
Upk3aQ9JKX8 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3aQ9JKX8 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.2□□□□□ -0.46
Upk3aQ9JKX8 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Upk3aQ9JKX8 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Upk3aQ9JKX8 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3aQ9JKX8 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3aQ9JKX8 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3aQ9JKX8 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Upk3aQ9JKX8 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3aQ9JKX8 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Upk3aQ9JKX8 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3aQ9JKX8 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3aQ9JKX8 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3aQ9JKX8 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3aQ9JKX8 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3aQ9JKX8 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.2□□□□□ -0.46
Upk3aQ9JKX8 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3aQ9JKX8 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3aQ9JKX8 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3aQ9JKX8 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3aQ9JKX8 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3aQ9JKX8 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3aQ9JKX8 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3aQ9JKX8 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3aQ9JKX8 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3aQ9JKX8 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3aQ9JKX8 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3aQ9JKX8 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3aQ9JKX8 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3aQ9JKX8 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Upk3aQ9JKX8 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3aQ9JKX8 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Upk3aQ9JKX8 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.19□□□□□ -0.46
Upk3aQ9JKX8 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3aQ9JKX8 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3aQ9JKX8 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3aQ9JKX8 Gm13342-201ENSMUST00000121055 207 ntBASIC12.19□□□□□ -0.46
Upk3aQ9JKX8 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.19□□□□□ -0.46
Upk3aQ9JKX8 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.19□□□□□ -0.46
Upk3aQ9JKX8 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3aQ9JKX8 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3aQ9JKX8 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.19□□□□□ -0.46
Upk3aQ9JKX8 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3aQ9JKX8 Gm9630-201ENSMUST00000178304 885 ntBASIC12.19□□□□□ -0.46
Upk3aQ9JKX8 Gm9022-201ENSMUST00000182482 992 ntBASIC12.19□□□□□ -0.46
Upk3aQ9JKX8 Gm43630-201ENSMUST00000201550 776 ntBASIC12.19□□□□□ -0.46
Upk3aQ9JKX8 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3aQ9JKX8 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.19□□□□□ -0.46
Upk3aQ9JKX8 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3aQ9JKX8 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3aQ9JKX8 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Upk3aQ9JKX8 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3aQ9JKX8 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3aQ9JKX8 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3aQ9JKX8 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3aQ9JKX8 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3aQ9JKX8 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3aQ9JKX8 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.19□□□□□ -0.46
Upk3aQ9JKX8 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.19□□□□□ -0.46
Upk3aQ9JKX8 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3aQ9JKX8 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3aQ9JKX8 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.18□□□□□ -0.46
Upk3aQ9JKX8 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3aQ9JKX8 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Upk3aQ9JKX8 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms