Protein–RNA interactions for Protein: Q9ESF1

Otof, Otoferlin, mousemouse

Predictions only

Length 1,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtofQ9ESF1 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
OtofQ9ESF1 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
OtofQ9ESF1 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
OtofQ9ESF1 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
OtofQ9ESF1 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
OtofQ9ESF1 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
OtofQ9ESF1 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.53□□□□□ -0.4
OtofQ9ESF1 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
OtofQ9ESF1 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.53□□□□□ -0.4
OtofQ9ESF1 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
OtofQ9ESF1 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
OtofQ9ESF1 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
OtofQ9ESF1 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
OtofQ9ESF1 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
OtofQ9ESF1 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
OtofQ9ESF1 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
OtofQ9ESF1 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
OtofQ9ESF1 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
OtofQ9ESF1 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
OtofQ9ESF1 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.53□□□□□ -0.4
OtofQ9ESF1 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
OtofQ9ESF1 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
OtofQ9ESF1 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.53□□□□□ -0.4
OtofQ9ESF1 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
OtofQ9ESF1 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.53□□□□□ -0.4
OtofQ9ESF1 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
OtofQ9ESF1 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.53□□□□□ -0.4
OtofQ9ESF1 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
OtofQ9ESF1 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
OtofQ9ESF1 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
OtofQ9ESF1 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.53□□□□□ -0.4
OtofQ9ESF1 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
OtofQ9ESF1 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
OtofQ9ESF1 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
OtofQ9ESF1 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
OtofQ9ESF1 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
OtofQ9ESF1 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
OtofQ9ESF1 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
OtofQ9ESF1 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
OtofQ9ESF1 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
OtofQ9ESF1 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.52□□□□□ -0.4
OtofQ9ESF1 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
OtofQ9ESF1 Gm43947-201ENSMUST00000203019 959 ntBASIC12.52□□□□□ -0.4
OtofQ9ESF1 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
OtofQ9ESF1 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
OtofQ9ESF1 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
OtofQ9ESF1 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.52□□□□□ -0.4
OtofQ9ESF1 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
OtofQ9ESF1 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
OtofQ9ESF1 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.52□□□□□ -0.4
OtofQ9ESF1 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
OtofQ9ESF1 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
OtofQ9ESF1 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
OtofQ9ESF1 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
OtofQ9ESF1 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
OtofQ9ESF1 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
OtofQ9ESF1 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
OtofQ9ESF1 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
OtofQ9ESF1 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
OtofQ9ESF1 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
OtofQ9ESF1 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
OtofQ9ESF1 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
OtofQ9ESF1 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
OtofQ9ESF1 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.52□□□□□ -0.41
OtofQ9ESF1 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.52□□□□□ -0.41
OtofQ9ESF1 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
OtofQ9ESF1 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.52□□□□□ -0.41
OtofQ9ESF1 Gm43962-201ENSMUST00000203898 190 ntBASIC12.52□□□□□ -0.41
OtofQ9ESF1 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
OtofQ9ESF1 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
OtofQ9ESF1 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
OtofQ9ESF1 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.52□□□□□ -0.41
OtofQ9ESF1 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
OtofQ9ESF1 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
OtofQ9ESF1 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
OtofQ9ESF1 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.52□□□□□ -0.41
OtofQ9ESF1 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
OtofQ9ESF1 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
OtofQ9ESF1 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
OtofQ9ESF1 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
OtofQ9ESF1 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
OtofQ9ESF1 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
OtofQ9ESF1 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
OtofQ9ESF1 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
OtofQ9ESF1 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
OtofQ9ESF1 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.51□□□□□ -0.41
OtofQ9ESF1 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
OtofQ9ESF1 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
OtofQ9ESF1 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.51□□□□□ -0.41
OtofQ9ESF1 Gm13996-201ENSMUST00000118456 430 ntBASIC12.51□□□□□ -0.41
OtofQ9ESF1 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
OtofQ9ESF1 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
OtofQ9ESF1 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
OtofQ9ESF1 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.51□□□□□ -0.41
OtofQ9ESF1 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
OtofQ9ESF1 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.51□□□□□ -0.41
OtofQ9ESF1 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.51□□□□□ -0.41
OtofQ9ESF1 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.51□□□□□ -0.41
OtofQ9ESF1 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
OtofQ9ESF1 Gm17812-201ENSMUST00000204935 318 ntBASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms