Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Gm4271-201ENSMUST00000174444 973 ntBASIC12.64□□□□□ -0.39
Tubb3Q9ERD7 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tubb3Q9ERD7 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Tubb3Q9ERD7 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Tubb3Q9ERD7 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Tubb3Q9ERD7 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tubb3Q9ERD7 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tubb3Q9ERD7 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tubb3Q9ERD7 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Tubb3Q9ERD7 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Tubb3Q9ERD7 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Tubb3Q9ERD7 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Tubb3Q9ERD7 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tubb3Q9ERD7 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tubb3Q9ERD7 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tubb3Q9ERD7 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tubb3Q9ERD7 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tubb3Q9ERD7 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.64□□□□□ -0.39
Tubb3Q9ERD7 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Tubb3Q9ERD7 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tubb3Q9ERD7 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Tubb3Q9ERD7 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tubb3Q9ERD7 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tubb3Q9ERD7 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tubb3Q9ERD7 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tubb3Q9ERD7 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Tubb3Q9ERD7 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tubb3Q9ERD7 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tubb3Q9ERD7 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.63□□□□□ -0.39
Tubb3Q9ERD7 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tubb3Q9ERD7 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.63□□□□□ -0.39
Tubb3Q9ERD7 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Tubb3Q9ERD7 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tubb3Q9ERD7 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Tubb3Q9ERD7 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.63□□□□□ -0.39
Tubb3Q9ERD7 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Tubb3Q9ERD7 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tubb3Q9ERD7 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tubb3Q9ERD7 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Tubb3Q9ERD7 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Tubb3Q9ERD7 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.63□□□□□ -0.39
Tubb3Q9ERD7 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tubb3Q9ERD7 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tubb3Q9ERD7 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Tubb3Q9ERD7 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tubb3Q9ERD7 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tubb3Q9ERD7 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Tubb3Q9ERD7 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Tubb3Q9ERD7 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tubb3Q9ERD7 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tubb3Q9ERD7 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tubb3Q9ERD7 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.63□□□□□ -0.39
Tubb3Q9ERD7 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.63□□□□□ -0.39
Tubb3Q9ERD7 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Tubb3Q9ERD7 Gm37922-201ENSMUST00000195596 455 ntBASIC12.63□□□□□ -0.39
Tubb3Q9ERD7 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Tubb3Q9ERD7 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.63□□□□□ -0.39
Tubb3Q9ERD7 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tubb3Q9ERD7 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.63□□□□□ -0.39
Tubb3Q9ERD7 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Tubb3Q9ERD7 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tubb3Q9ERD7 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Tubb3Q9ERD7 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.63□□□□□ -0.39
Tubb3Q9ERD7 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tubb3Q9ERD7 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.63□□□□□ -0.39
Tubb3Q9ERD7 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tubb3Q9ERD7 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tubb3Q9ERD7 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tubb3Q9ERD7 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tubb3Q9ERD7 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tubb3Q9ERD7 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.62□□□□□ -0.39
Tubb3Q9ERD7 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tubb3Q9ERD7 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.62□□□□□ -0.39
Tubb3Q9ERD7 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tubb3Q9ERD7 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tubb3Q9ERD7 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tubb3Q9ERD7 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tubb3Q9ERD7 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tubb3Q9ERD7 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.62□□□□□ -0.39
Tubb3Q9ERD7 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tubb3Q9ERD7 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Tubb3Q9ERD7 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.62□□□□□ -0.39
Tubb3Q9ERD7 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Tubb3Q9ERD7 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tubb3Q9ERD7 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Tubb3Q9ERD7 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.62□□□□□ -0.39
Tubb3Q9ERD7 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Tubb3Q9ERD7 Gm11618-201ENSMUST00000117946 267 ntBASIC12.62□□□□□ -0.39
Tubb3Q9ERD7 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.62□□□□□ -0.39
Tubb3Q9ERD7 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Tubb3Q9ERD7 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Tubb3Q9ERD7 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.62□□□□□ -0.39
Tubb3Q9ERD7 Gm27572-201ENSMUST00000183702 255 ntBASIC12.62□□□□□ -0.39
Tubb3Q9ERD7 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.62□□□□□ -0.39
Tubb3Q9ERD7 Gm42693-201ENSMUST00000196779 631 ntBASIC12.62□□□□□ -0.39
Tubb3Q9ERD7 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Tubb3Q9ERD7 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Tubb3Q9ERD7 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Tubb3Q9ERD7 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tubb3Q9ERD7 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms