Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gm12314-201ENSMUST00000118104 538 ntBASIC12.99□□□□□ -0.33
Nkx2-4Q9EQM3 Gm11362-201ENSMUST00000118838 850 ntBASIC12.99□□□□□ -0.33
Nkx2-4Q9EQM3 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC12.99□□□□□ -0.33
Nkx2-4Q9EQM3 Rmrp-201ENSMUST00000157463 271 ntBASIC12.99□□□□□ -0.33
Nkx2-4Q9EQM3 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.99□□□□□ -0.33
Nkx2-4Q9EQM3 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.99□□□□□ -0.33
Nkx2-4Q9EQM3 Gm42937-201ENSMUST00000197360 752 ntBASIC12.99□□□□□ -0.33
Nkx2-4Q9EQM3 Mir7686-201ENSMUST00000200604 57 ntBASIC12.99□□□□□ -0.33
Nkx2-4Q9EQM3 Gm4482-201ENSMUST00000200876 742 ntBASIC12.99□□□□□ -0.33
Nkx2-4Q9EQM3 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.99□□□□□ -0.33
Nkx2-4Q9EQM3 Gm43962-201ENSMUST00000203898 190 ntBASIC12.99□□□□□ -0.33
Nkx2-4Q9EQM3 Gm6905-201ENSMUST00000205729 511 ntBASIC12.99□□□□□ -0.33
Nkx2-4Q9EQM3 Gm270-201ENSMUST00000223010 976 ntBASIC12.99□□□□□ -0.33
Nkx2-4Q9EQM3 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.99□□□□□ -0.33
Nkx2-4Q9EQM3 Prrxl1-205ENSMUST00000228878 723 ntBASIC12.99□□□□□ -0.33
Nkx2-4Q9EQM3 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-4Q9EQM3 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-4Q9EQM3 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Nkx2-4Q9EQM3 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.99□□□□□ -0.33
Nkx2-4Q9EQM3 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Nkx2-4Q9EQM3 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Nkx2-4Q9EQM3 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-4Q9EQM3 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-4Q9EQM3 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Nkx2-4Q9EQM3 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.99□□□□□ -0.33
Nkx2-4Q9EQM3 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Nkx2-4Q9EQM3 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.99□□□□□ -0.33
Nkx2-4Q9EQM3 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-4Q9EQM3 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-4Q9EQM3 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-4Q9EQM3 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-4Q9EQM3 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-4Q9EQM3 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Nkx2-4Q9EQM3 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.98□□□□□ -0.33
Nkx2-4Q9EQM3 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.98□□□□□ -0.33
Nkx2-4Q9EQM3 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-4Q9EQM3 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-4Q9EQM3 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-4Q9EQM3 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Nkx2-4Q9EQM3 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.98□□□□□ -0.33
Nkx2-4Q9EQM3 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.98□□□□□ -0.33
Nkx2-4Q9EQM3 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-4Q9EQM3 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-4Q9EQM3 Gm3671-201ENSMUST00000182463 1007 ntBASIC12.98□□□□□ -0.33
Nkx2-4Q9EQM3 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.98□□□□□ -0.33
Nkx2-4Q9EQM3 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC12.98□□□□□ -0.33
Nkx2-4Q9EQM3 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.98□□□□□ -0.33
Nkx2-4Q9EQM3 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.98□□□□□ -0.33
Nkx2-4Q9EQM3 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.98□□□□□ -0.33
Nkx2-4Q9EQM3 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-4Q9EQM3 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-4Q9EQM3 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-4Q9EQM3 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-4Q9EQM3 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.98□□□□□ -0.33
Nkx2-4Q9EQM3 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.98□□□□□ -0.33
Nkx2-4Q9EQM3 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Nkx2-4Q9EQM3 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-4Q9EQM3 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-4Q9EQM3 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Nkx2-4Q9EQM3 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Nkx2-4Q9EQM3 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-4Q9EQM3 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Nkx2-4Q9EQM3 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Nkx2-4Q9EQM3 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Nkx2-4Q9EQM3 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-4Q9EQM3 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-4Q9EQM3 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Nkx2-4Q9EQM3 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-4Q9EQM3 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-4Q9EQM3 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-4Q9EQM3 Gm23596-201ENSMUST00000104304 132 ntBASIC12.97□□□□□ -0.33
Nkx2-4Q9EQM3 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-4Q9EQM3 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-4Q9EQM3 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Nkx2-4Q9EQM3 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-4Q9EQM3 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC12.97□□□□□ -0.33
Nkx2-4Q9EQM3 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Nkx2-4Q9EQM3 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-4Q9EQM3 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-4Q9EQM3 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Nkx2-4Q9EQM3 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Nkx2-4Q9EQM3 Gm37028-201ENSMUST00000194276 107 ntBASIC12.97□□□□□ -0.33
Nkx2-4Q9EQM3 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.97□□□□□ -0.33
Nkx2-4Q9EQM3 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC12.97□□□□□ -0.33
Nkx2-4Q9EQM3 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.97□□□□□ -0.33
Nkx2-4Q9EQM3 AC154176.1-201ENSMUST00000225897 220 ntBASIC12.97□□□□□ -0.33
Nkx2-4Q9EQM3 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Nkx2-4Q9EQM3 Gm9996-201ENSMUST00000070359 913 ntBASIC12.97□□□□□ -0.33
Nkx2-4Q9EQM3 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-4Q9EQM3 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-4Q9EQM3 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-4Q9EQM3 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Nkx2-4Q9EQM3 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-4Q9EQM3 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Nkx2-4Q9EQM3 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-4Q9EQM3 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-4Q9EQM3 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Nkx2-4Q9EQM3 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-4Q9EQM3 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.97□□□□□ -0.33
Nkx2-4Q9EQM3 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms