Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp2aQ9DB34 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp2aQ9DB34 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp2aQ9DB34 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
Chmp2aQ9DB34 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp2aQ9DB34 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp2aQ9DB34 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp2aQ9DB34 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp2aQ9DB34 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.27□□□□□ -0.29
Chmp2aQ9DB34 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp2aQ9DB34 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp2aQ9DB34 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp2aQ9DB34 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp2aQ9DB34 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Chmp2aQ9DB34 Snord83b-201ENSMUST00000104546 94 ntBASIC13.26□□□□□ -0.29
Chmp2aQ9DB34 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.26□□□□□ -0.29
Chmp2aQ9DB34 Gm5187-201ENSMUST00000117317 991 ntBASIC13.26□□□□□ -0.29
Chmp2aQ9DB34 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp2aQ9DB34 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp2aQ9DB34 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp2aQ9DB34 Gm17420-201ENSMUST00000164753 153 ntBASIC13.26□□□□□ -0.29
Chmp2aQ9DB34 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp2aQ9DB34 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.26□□□□□ -0.29
Chmp2aQ9DB34 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.26□□□□□ -0.29
Chmp2aQ9DB34 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.26□□□□□ -0.29
Chmp2aQ9DB34 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Chmp2aQ9DB34 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Chmp2aQ9DB34 Gm27514-201ENSMUST00000183692 110 ntBASIC13.26□□□□□ -0.29
Chmp2aQ9DB34 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Chmp2aQ9DB34 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.26□□□□□ -0.29
Chmp2aQ9DB34 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.26□□□□□ -0.29
Chmp2aQ9DB34 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.26□□□□□ -0.29
Chmp2aQ9DB34 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.26□□□□□ -0.29
Chmp2aQ9DB34 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp2aQ9DB34 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp2aQ9DB34 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp2aQ9DB34 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp2aQ9DB34 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp2aQ9DB34 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp2aQ9DB34 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp2aQ9DB34 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Chmp2aQ9DB34 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Chmp2aQ9DB34 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp2aQ9DB34 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Chmp2aQ9DB34 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.25□□□□□ -0.29
Chmp2aQ9DB34 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.25□□□□□ -0.29
Chmp2aQ9DB34 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2aQ9DB34 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2aQ9DB34 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2aQ9DB34 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2aQ9DB34 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.25□□□□□ -0.29
Chmp2aQ9DB34 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2aQ9DB34 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Chmp2aQ9DB34 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2aQ9DB34 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2aQ9DB34 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2aQ9DB34 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2aQ9DB34 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.25□□□□□ -0.29
Chmp2aQ9DB34 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2aQ9DB34 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2aQ9DB34 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2aQ9DB34 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2aQ9DB34 Gm11591-201ENSMUST00000120063 702 ntBASIC13.25□□□□□ -0.29
Chmp2aQ9DB34 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.25□□□□□ -0.29
Chmp2aQ9DB34 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.25□□□□□ -0.29
Chmp2aQ9DB34 Gm7809-201ENSMUST00000153199 742 ntBASIC13.25□□□□□ -0.29
Chmp2aQ9DB34 Gm25261-201ENSMUST00000157416 134 ntBASIC13.25□□□□□ -0.29
Chmp2aQ9DB34 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.25□□□□□ -0.29
Chmp2aQ9DB34 Gm23363-201ENSMUST00000175024 79 ntBASIC13.25□□□□□ -0.29
Chmp2aQ9DB34 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.25□□□□□ -0.29
Chmp2aQ9DB34 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.25□□□□□ -0.29
Chmp2aQ9DB34 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2aQ9DB34 Gm9823-201ENSMUST00000051212 327 ntBASIC13.25□□□□□ -0.29
Chmp2aQ9DB34 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.25□□□□□ -0.29
Chmp2aQ9DB34 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2aQ9DB34 Mir339-201ENSMUST00000083659 96 ntBASIC13.25□□□□□ -0.29
Chmp2aQ9DB34 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Chmp2aQ9DB34 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2aQ9DB34 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2aQ9DB34 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2aQ9DB34 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2aQ9DB34 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2aQ9DB34 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.25□□□□□ -0.29
Chmp2aQ9DB34 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2aQ9DB34 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2aQ9DB34 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2aQ9DB34 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Chmp2aQ9DB34 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2aQ9DB34 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Chmp2aQ9DB34 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp2aQ9DB34 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp2aQ9DB34 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp2aQ9DB34 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp2aQ9DB34 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.24□□□□□ -0.29
Chmp2aQ9DB34 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp2aQ9DB34 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.24□□□□□ -0.29
Chmp2aQ9DB34 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.24□□□□□ -0.29
Chmp2aQ9DB34 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp2aQ9DB34 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp2aQ9DB34 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms