Protein–RNA interactions for Protein: Q9D5U5

Pudp, Pseudouridine-5'-phosphatase, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PudpQ9D5U5 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
PudpQ9D5U5 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PudpQ9D5U5 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
PudpQ9D5U5 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
PudpQ9D5U5 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
PudpQ9D5U5 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PudpQ9D5U5 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
PudpQ9D5U5 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PudpQ9D5U5 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PudpQ9D5U5 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PudpQ9D5U5 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.3□□□□□ -0.44
PudpQ9D5U5 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.3□□□□□ -0.44
PudpQ9D5U5 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
PudpQ9D5U5 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
PudpQ9D5U5 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
PudpQ9D5U5 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PudpQ9D5U5 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.3□□□□□ -0.44
PudpQ9D5U5 Gm6983-201ENSMUST00000214912 628 ntBASIC12.3□□□□□ -0.44
PudpQ9D5U5 Gm17330-201ENSMUST00000221047 165 ntBASIC12.3□□□□□ -0.44
PudpQ9D5U5 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PudpQ9D5U5 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PudpQ9D5U5 Gm5356-201ENSMUST00000093326 615 ntBASIC12.3□□□□□ -0.44
PudpQ9D5U5 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PudpQ9D5U5 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PudpQ9D5U5 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
PudpQ9D5U5 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
PudpQ9D5U5 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.3□□□□□ -0.44
PudpQ9D5U5 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
PudpQ9D5U5 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
PudpQ9D5U5 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
PudpQ9D5U5 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
PudpQ9D5U5 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
PudpQ9D5U5 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PudpQ9D5U5 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PudpQ9D5U5 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PudpQ9D5U5 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PudpQ9D5U5 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PudpQ9D5U5 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PudpQ9D5U5 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
PudpQ9D5U5 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
PudpQ9D5U5 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PudpQ9D5U5 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
PudpQ9D5U5 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
PudpQ9D5U5 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
PudpQ9D5U5 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
PudpQ9D5U5 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
PudpQ9D5U5 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
PudpQ9D5U5 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.29□□□□□ -0.44
PudpQ9D5U5 Gm13689-201ENSMUST00000119360 685 ntBASIC12.29□□□□□ -0.44
PudpQ9D5U5 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.29□□□□□ -0.44
PudpQ9D5U5 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.29□□□□□ -0.44
PudpQ9D5U5 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.29□□□□□ -0.44
PudpQ9D5U5 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PudpQ9D5U5 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PudpQ9D5U5 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PudpQ9D5U5 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PudpQ9D5U5 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.29□□□□□ -0.44
PudpQ9D5U5 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PudpQ9D5U5 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PudpQ9D5U5 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
PudpQ9D5U5 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PudpQ9D5U5 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
PudpQ9D5U5 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PudpQ9D5U5 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
PudpQ9D5U5 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
PudpQ9D5U5 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
PudpQ9D5U5 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PudpQ9D5U5 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.29□□□□□ -0.44
PudpQ9D5U5 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PudpQ9D5U5 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PudpQ9D5U5 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PudpQ9D5U5 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PudpQ9D5U5 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PudpQ9D5U5 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PudpQ9D5U5 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PudpQ9D5U5 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.29□□□□□ -0.44
PudpQ9D5U5 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PudpQ9D5U5 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PudpQ9D5U5 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PudpQ9D5U5 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.28□□□□□ -0.44
PudpQ9D5U5 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.28□□□□□ -0.44
PudpQ9D5U5 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
PudpQ9D5U5 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PudpQ9D5U5 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PudpQ9D5U5 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
PudpQ9D5U5 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PudpQ9D5U5 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
PudpQ9D5U5 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PudpQ9D5U5 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PudpQ9D5U5 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
PudpQ9D5U5 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PudpQ9D5U5 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PudpQ9D5U5 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PudpQ9D5U5 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PudpQ9D5U5 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.28□□□□□ -0.44
PudpQ9D5U5 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
PudpQ9D5U5 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
PudpQ9D5U5 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PudpQ9D5U5 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
PudpQ9D5U5 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms