Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cfap53Q9D439 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cfap53Q9D439 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cfap53Q9D439 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cfap53Q9D439 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cfap53Q9D439 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cfap53Q9D439 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Cfap53Q9D439 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Cfap53Q9D439 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cfap53Q9D439 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cfap53Q9D439 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cfap53Q9D439 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.96□□□□□ -0.17
Cfap53Q9D439 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Cfap53Q9D439 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cfap53Q9D439 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cfap53Q9D439 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cfap53Q9D439 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cfap53Q9D439 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Cfap53Q9D439 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cfap53Q9D439 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cfap53Q9D439 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cfap53Q9D439 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cfap53Q9D439 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cfap53Q9D439 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Cfap53Q9D439 Gm22121-201ENSMUST00000175148 54 ntBASIC13.96□□□□□ -0.17
Cfap53Q9D439 Gm5745-201ENSMUST00000183748 313 ntBASIC13.96□□□□□ -0.17
Cfap53Q9D439 Gm4768-201ENSMUST00000206199 686 ntBASIC13.96□□□□□ -0.17
Cfap53Q9D439 Gm19163-201ENSMUST00000223313 780 ntBASIC13.96□□□□□ -0.17
Cfap53Q9D439 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cfap53Q9D439 Mir339-201ENSMUST00000083659 96 ntBASIC13.96□□□□□ -0.17
Cfap53Q9D439 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cfap53Q9D439 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cfap53Q9D439 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cfap53Q9D439 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cfap53Q9D439 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cfap53Q9D439 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cfap53Q9D439 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Cfap53Q9D439 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cfap53Q9D439 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cfap53Q9D439 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cfap53Q9D439 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cfap53Q9D439 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.96□□□□□ -0.18
Cfap53Q9D439 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Cfap53Q9D439 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cfap53Q9D439 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.95□□□□□ -0.18
Cfap53Q9D439 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
Cfap53Q9D439 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.95□□□□□ -0.18
Cfap53Q9D439 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Cfap53Q9D439 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cfap53Q9D439 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Cfap53Q9D439 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.95□□□□□ -0.18
Cfap53Q9D439 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cfap53Q9D439 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cfap53Q9D439 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Cfap53Q9D439 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cfap53Q9D439 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cfap53Q9D439 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cfap53Q9D439 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Cfap53Q9D439 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cfap53Q9D439 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cfap53Q9D439 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cfap53Q9D439 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cfap53Q9D439 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cfap53Q9D439 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.95□□□□□ -0.18
Cfap53Q9D439 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.95□□□□□ -0.18
Cfap53Q9D439 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cfap53Q9D439 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cfap53Q9D439 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cfap53Q9D439 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cfap53Q9D439 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.94□□□□□ -0.18
Cfap53Q9D439 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cfap53Q9D439 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cfap53Q9D439 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Cfap53Q9D439 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cfap53Q9D439 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cfap53Q9D439 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Cfap53Q9D439 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cfap53Q9D439 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cfap53Q9D439 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cfap53Q9D439 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cfap53Q9D439 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cfap53Q9D439 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.94□□□□□ -0.18
Cfap53Q9D439 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cfap53Q9D439 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.94□□□□□ -0.18
Cfap53Q9D439 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cfap53Q9D439 Gm12390-201ENSMUST00000117897 397 ntBASIC13.94□□□□□ -0.18
Cfap53Q9D439 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.94□□□□□ -0.18
Cfap53Q9D439 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cfap53Q9D439 Gm17150-201ENSMUST00000165577 381 ntBASIC13.94□□□□□ -0.18
Cfap53Q9D439 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cfap53Q9D439 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cfap53Q9D439 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Cfap53Q9D439 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cfap53Q9D439 Gm43818-201ENSMUST00000200605 466 ntBASIC13.94□□□□□ -0.18
Cfap53Q9D439 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.94□□□□□ -0.18
Cfap53Q9D439 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cfap53Q9D439 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cfap53Q9D439 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cfap53Q9D439 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cfap53Q9D439 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms