Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stag1Q9D3E6 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Stag1Q9D3E6 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stag1Q9D3E6 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Stag1Q9D3E6 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stag1Q9D3E6 Gm14028-201ENSMUST00000117434 479 ntBASIC15.14■□□□□ 0.01
Stag1Q9D3E6 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC15.14■□□□□ 0.01
Stag1Q9D3E6 Gm14999-201ENSMUST00000121039 624 ntBASIC15.14■□□□□ 0.01
Stag1Q9D3E6 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC15.14■□□□□ 0.01
Stag1Q9D3E6 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stag1Q9D3E6 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Stag1Q9D3E6 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC15.14■□□□□ 0.01
Stag1Q9D3E6 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC15.14■□□□□ 0.01
Stag1Q9D3E6 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Stag1Q9D3E6 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stag1Q9D3E6 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stag1Q9D3E6 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Stag1Q9D3E6 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Stag1Q9D3E6 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stag1Q9D3E6 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stag1Q9D3E6 AC151895.1-201ENSMUST00000219025 1742 ntBASIC15.14■□□□□ 0.01
Stag1Q9D3E6 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC15.14■□□□□ 0.01
Stag1Q9D3E6 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stag1Q9D3E6 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stag1Q9D3E6 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stag1Q9D3E6 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC15.14■□□□□ 0.01
Stag1Q9D3E6 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stag1Q9D3E6 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Stag1Q9D3E6 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Stag1Q9D3E6 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Stag1Q9D3E6 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Stag1Q9D3E6 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Stag1Q9D3E6 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Stag1Q9D3E6 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Stag1Q9D3E6 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Stag1Q9D3E6 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Stag1Q9D3E6 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Stag1Q9D3E6 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Stag1Q9D3E6 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Stag1Q9D3E6 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Stag1Q9D3E6 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Stag1Q9D3E6 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Stag1Q9D3E6 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Stag1Q9D3E6 Gm14277-201ENSMUST00000121195 360 ntBASIC15.13■□□□□ 0.01
Stag1Q9D3E6 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC15.13■□□□□ 0.01
Stag1Q9D3E6 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC15.13■□□□□ 0.01
Stag1Q9D3E6 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC15.13■□□□□ 0.01
Stag1Q9D3E6 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Stag1Q9D3E6 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Stag1Q9D3E6 Gm25700-201ENSMUST00000177693 110 ntBASIC15.13■□□□□ 0.01
Stag1Q9D3E6 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Stag1Q9D3E6 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC15.13■□□□□ 0.01
Stag1Q9D3E6 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC15.13■□□□□ 0.01
Stag1Q9D3E6 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC15.13■□□□□ 0.01
Stag1Q9D3E6 AC154222.2-201ENSMUST00000225848 607 ntBASIC15.13■□□□□ 0.01
Stag1Q9D3E6 AC123665.1-201ENSMUST00000228204 438 ntBASIC15.13■□□□□ 0.01
Stag1Q9D3E6 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Stag1Q9D3E6 Gm10312-201ENSMUST00000078515 489 ntBASIC15.13■□□□□ 0.01
Stag1Q9D3E6 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Stag1Q9D3E6 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Stag1Q9D3E6 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC15.13■□□□□ 0.01
Stag1Q9D3E6 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Stag1Q9D3E6 Crry-ps-201ENSMUST00000079090 1309 ntBASIC15.13■□□□□ 0.01
Stag1Q9D3E6 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC15.13■□□□□ 0.01
Stag1Q9D3E6 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Stag1Q9D3E6 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Stag1Q9D3E6 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Stag1Q9D3E6 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Stag1Q9D3E6 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Stag1Q9D3E6 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Stag1Q9D3E6 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Stag1Q9D3E6 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Stag1Q9D3E6 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC15.12■□□□□ 0.01
Stag1Q9D3E6 Gm4909-201ENSMUST00000118749 794 ntBASIC15.12■□□□□ 0.01
Stag1Q9D3E6 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC15.12■□□□□ 0.01
Stag1Q9D3E6 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC15.12■□□□□ 0.01
Stag1Q9D3E6 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Stag1Q9D3E6 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Stag1Q9D3E6 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Stag1Q9D3E6 Gm9445-201ENSMUST00000207454 1285 ntBASIC15.12■□□□□ 0.01
Stag1Q9D3E6 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Stag1Q9D3E6 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Stag1Q9D3E6 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC15.12■□□□□ 0.01
Stag1Q9D3E6 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC15.12■□□□□ 0.01
Stag1Q9D3E6 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Stag1Q9D3E6 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Stag1Q9D3E6 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Stag1Q9D3E6 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Stag1Q9D3E6 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Stag1Q9D3E6 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Stag1Q9D3E6 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Stag1Q9D3E6 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Stag1Q9D3E6 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Stag1Q9D3E6 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Stag1Q9D3E6 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Stag1Q9D3E6 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Stag1Q9D3E6 Gm5846-201ENSMUST00000193146 1414 ntBASIC15.11■□□□□ 0.01
Stag1Q9D3E6 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Stag1Q9D3E6 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Stag1Q9D3E6 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms