Protein–RNA interactions for Protein: Q9D394

Rufy3, Protein RUFY3, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rufy3Q9D394 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rufy3Q9D394 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rufy3Q9D394 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rufy3Q9D394 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rufy3Q9D394 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rufy3Q9D394 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rufy3Q9D394 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rufy3Q9D394 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rufy3Q9D394 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rufy3Q9D394 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rufy3Q9D394 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rufy3Q9D394 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Rufy3Q9D394 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rufy3Q9D394 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.87□□□□□ -0.03
Rufy3Q9D394 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Rufy3Q9D394 Gm36970-201ENSMUST00000193688 1859 ntBASIC14.87□□□□□ -0.03
Rufy3Q9D394 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rufy3Q9D394 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rufy3Q9D394 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rufy3Q9D394 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Rufy3Q9D394 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rufy3Q9D394 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rufy3Q9D394 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rufy3Q9D394 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rufy3Q9D394 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rufy3Q9D394 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rufy3Q9D394 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rufy3Q9D394 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rufy3Q9D394 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Rufy3Q9D394 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Rufy3Q9D394 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rufy3Q9D394 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC14.87□□□□□ -0.03
Rufy3Q9D394 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rufy3Q9D394 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC14.87□□□□□ -0.03
Rufy3Q9D394 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rufy3Q9D394 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rufy3Q9D394 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rufy3Q9D394 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rufy3Q9D394 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rufy3Q9D394 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rufy3Q9D394 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rufy3Q9D394 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC14.87□□□□□ -0.03
Rufy3Q9D394 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rufy3Q9D394 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Rufy3Q9D394 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rufy3Q9D394 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rufy3Q9D394 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rufy3Q9D394 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rufy3Q9D394 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rufy3Q9D394 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rufy3Q9D394 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rufy3Q9D394 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rufy3Q9D394 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rufy3Q9D394 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rufy3Q9D394 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rufy3Q9D394 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rufy3Q9D394 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rufy3Q9D394 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rufy3Q9D394 Gm16177-201ENSMUST00000120728 718 ntBASIC14.86□□□□□ -0.03
Rufy3Q9D394 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.86□□□□□ -0.03
Rufy3Q9D394 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.86□□□□□ -0.03
Rufy3Q9D394 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Rufy3Q9D394 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rufy3Q9D394 Gm9630-201ENSMUST00000178304 885 ntBASIC14.86□□□□□ -0.03
Rufy3Q9D394 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.86□□□□□ -0.03
Rufy3Q9D394 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rufy3Q9D394 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.86□□□□□ -0.03
Rufy3Q9D394 Gm7653-201ENSMUST00000214567 508 ntBASIC14.86□□□□□ -0.03
Rufy3Q9D394 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rufy3Q9D394 Gm10371-202ENSMUST00000228010 1081 ntBASIC14.86□□□□□ -0.03
Rufy3Q9D394 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rufy3Q9D394 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rufy3Q9D394 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rufy3Q9D394 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rufy3Q9D394 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rufy3Q9D394 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rufy3Q9D394 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rufy3Q9D394 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rufy3Q9D394 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rufy3Q9D394 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rufy3Q9D394 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rufy3Q9D394 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rufy3Q9D394 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rufy3Q9D394 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rufy3Q9D394 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rufy3Q9D394 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC14.86□□□□□ -0.03
Rufy3Q9D394 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rufy3Q9D394 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rufy3Q9D394 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rufy3Q9D394 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC14.85□□□□□ -0.03
Rufy3Q9D394 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rufy3Q9D394 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Rufy3Q9D394 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rufy3Q9D394 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rufy3Q9D394 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rufy3Q9D394 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Rufy3Q9D394 Gm18227-201ENSMUST00000211082 1468 ntBASIC14.85□□□□□ -0.03
Rufy3Q9D394 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rufy3Q9D394 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rufy3Q9D394 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms