Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim42Q9D2H5 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim42Q9D2H5 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim42Q9D2H5 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim42Q9D2H5 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trim42Q9D2H5 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trim42Q9D2H5 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim42Q9D2H5 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.76□□□□□ -0.37
Trim42Q9D2H5 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim42Q9D2H5 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.76□□□□□ -0.37
Trim42Q9D2H5 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim42Q9D2H5 Gm17795-201ENSMUST00000214505 757 ntBASIC12.76□□□□□ -0.37
Trim42Q9D2H5 Gm18515-201ENSMUST00000219755 797 ntBASIC12.76□□□□□ -0.37
Trim42Q9D2H5 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.76□□□□□ -0.37
Trim42Q9D2H5 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim42Q9D2H5 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim42Q9D2H5 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim42Q9D2H5 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim42Q9D2H5 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim42Q9D2H5 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.76□□□□□ -0.37
Trim42Q9D2H5 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.76□□□□□ -0.37
Trim42Q9D2H5 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim42Q9D2H5 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trim42Q9D2H5 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim42Q9D2H5 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim42Q9D2H5 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim42Q9D2H5 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trim42Q9D2H5 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim42Q9D2H5 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.76□□□□□ -0.37
Trim42Q9D2H5 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim42Q9D2H5 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim42Q9D2H5 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim42Q9D2H5 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trim42Q9D2H5 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim42Q9D2H5 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim42Q9D2H5 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim42Q9D2H5 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim42Q9D2H5 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim42Q9D2H5 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim42Q9D2H5 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim42Q9D2H5 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim42Q9D2H5 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim42Q9D2H5 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim42Q9D2H5 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim42Q9D2H5 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Trim42Q9D2H5 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.75□□□□□ -0.37
Trim42Q9D2H5 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim42Q9D2H5 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim42Q9D2H5 Gm12106-201ENSMUST00000116006 1200 ntBASIC12.75□□□□□ -0.37
Trim42Q9D2H5 Gm12485-201ENSMUST00000119641 291 ntBASIC12.75□□□□□ -0.37
Trim42Q9D2H5 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.75□□□□□ -0.37
Trim42Q9D2H5 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim42Q9D2H5 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim42Q9D2H5 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim42Q9D2H5 Gm26308-201ENSMUST00000157768 69 ntBASIC12.75□□□□□ -0.37
Trim42Q9D2H5 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim42Q9D2H5 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.75□□□□□ -0.37
Trim42Q9D2H5 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim42Q9D2H5 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim42Q9D2H5 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim42Q9D2H5 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim42Q9D2H5 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim42Q9D2H5 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim42Q9D2H5 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim42Q9D2H5 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trim42Q9D2H5 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim42Q9D2H5 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim42Q9D2H5 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim42Q9D2H5 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim42Q9D2H5 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim42Q9D2H5 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim42Q9D2H5 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim42Q9D2H5 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Trim42Q9D2H5 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim42Q9D2H5 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim42Q9D2H5 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim42Q9D2H5 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim42Q9D2H5 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim42Q9D2H5 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim42Q9D2H5 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trim42Q9D2H5 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim42Q9D2H5 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Trim42Q9D2H5 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim42Q9D2H5 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim42Q9D2H5 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim42Q9D2H5 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim42Q9D2H5 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim42Q9D2H5 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.74□□□□□ -0.37
Trim42Q9D2H5 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.74□□□□□ -0.37
Trim42Q9D2H5 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim42Q9D2H5 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim42Q9D2H5 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim42Q9D2H5 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim42Q9D2H5 Mir449b-201ENSMUST00000104833 80 ntBASIC12.74□□□□□ -0.37
Trim42Q9D2H5 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim42Q9D2H5 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim42Q9D2H5 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.74□□□□□ -0.37
Trim42Q9D2H5 Gm37319-201ENSMUST00000193500 636 ntBASIC12.74□□□□□ -0.37
Trim42Q9D2H5 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim42Q9D2H5 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms