Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shmt2Q9CZN7 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shmt2Q9CZN7 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Shmt2Q9CZN7 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Shmt2Q9CZN7 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shmt2Q9CZN7 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.15□□□□□ -0.46
Shmt2Q9CZN7 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.15□□□□□ -0.46
Shmt2Q9CZN7 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.15□□□□□ -0.46
Shmt2Q9CZN7 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.15□□□□□ -0.46
Shmt2Q9CZN7 Gm11618-201ENSMUST00000117946 267 ntBASIC12.15□□□□□ -0.46
Shmt2Q9CZN7 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shmt2Q9CZN7 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Shmt2Q9CZN7 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Shmt2Q9CZN7 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shmt2Q9CZN7 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.15□□□□□ -0.46
Shmt2Q9CZN7 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.15□□□□□ -0.46
Shmt2Q9CZN7 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.15□□□□□ -0.46
Shmt2Q9CZN7 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.15□□□□□ -0.46
Shmt2Q9CZN7 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.15□□□□□ -0.46
Shmt2Q9CZN7 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.15□□□□□ -0.46
Shmt2Q9CZN7 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.15□□□□□ -0.46
Shmt2Q9CZN7 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shmt2Q9CZN7 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shmt2Q9CZN7 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shmt2Q9CZN7 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shmt2Q9CZN7 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shmt2Q9CZN7 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shmt2Q9CZN7 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shmt2Q9CZN7 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Shmt2Q9CZN7 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shmt2Q9CZN7 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Shmt2Q9CZN7 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Shmt2Q9CZN7 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.15□□□□□ -0.46
Shmt2Q9CZN7 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Shmt2Q9CZN7 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Shmt2Q9CZN7 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Shmt2Q9CZN7 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Shmt2Q9CZN7 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Shmt2Q9CZN7 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shmt2Q9CZN7 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Shmt2Q9CZN7 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Shmt2Q9CZN7 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Shmt2Q9CZN7 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Shmt2Q9CZN7 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Shmt2Q9CZN7 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.15□□□□□ -0.47
Shmt2Q9CZN7 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Shmt2Q9CZN7 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.47
Shmt2Q9CZN7 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shmt2Q9CZN7 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.14□□□□□ -0.47
Shmt2Q9CZN7 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.14□□□□□ -0.47
Shmt2Q9CZN7 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shmt2Q9CZN7 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shmt2Q9CZN7 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.14□□□□□ -0.47
Shmt2Q9CZN7 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shmt2Q9CZN7 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shmt2Q9CZN7 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shmt2Q9CZN7 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Shmt2Q9CZN7 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shmt2Q9CZN7 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shmt2Q9CZN7 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Shmt2Q9CZN7 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shmt2Q9CZN7 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Shmt2Q9CZN7 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Shmt2Q9CZN7 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shmt2Q9CZN7 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shmt2Q9CZN7 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Shmt2Q9CZN7 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.14□□□□□ -0.47
Shmt2Q9CZN7 Gm24644-201ENSMUST00000157114 139 ntBASIC12.14□□□□□ -0.47
Shmt2Q9CZN7 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shmt2Q9CZN7 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Shmt2Q9CZN7 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.14□□□□□ -0.47
Shmt2Q9CZN7 Gm29649-201ENSMUST00000185649 419 ntBASIC12.14□□□□□ -0.47
Shmt2Q9CZN7 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.14□□□□□ -0.47
Shmt2Q9CZN7 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shmt2Q9CZN7 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.14□□□□□ -0.47
Shmt2Q9CZN7 Gm19931-201ENSMUST00000198920 368 ntBASIC12.14□□□□□ -0.47
Shmt2Q9CZN7 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shmt2Q9CZN7 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.14□□□□□ -0.47
Shmt2Q9CZN7 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Shmt2Q9CZN7 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shmt2Q9CZN7 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shmt2Q9CZN7 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shmt2Q9CZN7 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shmt2Q9CZN7 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.14□□□□□ -0.47
Shmt2Q9CZN7 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Shmt2Q9CZN7 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shmt2Q9CZN7 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shmt2Q9CZN7 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.14□□□□□ -0.47
Shmt2Q9CZN7 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Shmt2Q9CZN7 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shmt2Q9CZN7 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shmt2Q9CZN7 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms