Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf135Q9CWS1 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Rnf135Q9CWS1 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf135Q9CWS1 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf135Q9CWS1 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf135Q9CWS1 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf135Q9CWS1 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf135Q9CWS1 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf135Q9CWS1 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf135Q9CWS1 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf135Q9CWS1 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf135Q9CWS1 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf135Q9CWS1 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf135Q9CWS1 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf135Q9CWS1 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf135Q9CWS1 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf135Q9CWS1 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.23□□□□□ -0.29
Rnf135Q9CWS1 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Rnf135Q9CWS1 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf135Q9CWS1 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.23□□□□□ -0.29
Rnf135Q9CWS1 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf135Q9CWS1 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf135Q9CWS1 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC13.23□□□□□ -0.29
Rnf135Q9CWS1 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Rnf135Q9CWS1 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Rnf135Q9CWS1 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.23□□□□□ -0.29
Rnf135Q9CWS1 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.23□□□□□ -0.29
Rnf135Q9CWS1 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.23□□□□□ -0.29
Rnf135Q9CWS1 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.23□□□□□ -0.29
Rnf135Q9CWS1 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf135Q9CWS1 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf135Q9CWS1 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf135Q9CWS1 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf135Q9CWS1 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf135Q9CWS1 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf135Q9CWS1 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf135Q9CWS1 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf135Q9CWS1 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf135Q9CWS1 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf135Q9CWS1 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Rnf135Q9CWS1 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf135Q9CWS1 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf135Q9CWS1 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.23□□□□□ -0.29
Rnf135Q9CWS1 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf135Q9CWS1 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf135Q9CWS1 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Rnf135Q9CWS1 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Rnf135Q9CWS1 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
Rnf135Q9CWS1 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf135Q9CWS1 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf135Q9CWS1 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf135Q9CWS1 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf135Q9CWS1 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf135Q9CWS1 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf135Q9CWS1 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Rnf135Q9CWS1 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.22□□□□□ -0.29
Rnf135Q9CWS1 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf135Q9CWS1 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.22□□□□□ -0.29
Rnf135Q9CWS1 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.22□□□□□ -0.29
Rnf135Q9CWS1 Gm12291-201ENSMUST00000121627 311 ntBASIC13.22□□□□□ -0.29
Rnf135Q9CWS1 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.22□□□□□ -0.29
Rnf135Q9CWS1 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Rnf135Q9CWS1 Gm29127-201ENSMUST00000188304 517 ntBASIC13.22□□□□□ -0.29
Rnf135Q9CWS1 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.22□□□□□ -0.29
Rnf135Q9CWS1 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.22□□□□□ -0.29
Rnf135Q9CWS1 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Rnf135Q9CWS1 Gm8399-201ENSMUST00000082300 1117 ntBASIC13.22□□□□□ -0.29
Rnf135Q9CWS1 Olfr582-201ENSMUST00000098212 960 ntBASIC13.22□□□□□ -0.29
Rnf135Q9CWS1 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf135Q9CWS1 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf135Q9CWS1 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf135Q9CWS1 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf135Q9CWS1 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf135Q9CWS1 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Rnf135Q9CWS1 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf135Q9CWS1 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf135Q9CWS1 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf135Q9CWS1 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.22□□□□□ -0.29
Rnf135Q9CWS1 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf135Q9CWS1 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf135Q9CWS1 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf135Q9CWS1 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf135Q9CWS1 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf135Q9CWS1 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf135Q9CWS1 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.21□□□□□ -0.29
Rnf135Q9CWS1 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf135Q9CWS1 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf135Q9CWS1 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf135Q9CWS1 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf135Q9CWS1 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf135Q9CWS1 Mir1247-201ENSMUST00000116706 82 ntBASIC13.21□□□□□ -0.29
Rnf135Q9CWS1 Gm11618-201ENSMUST00000117946 267 ntBASIC13.21□□□□□ -0.29
Rnf135Q9CWS1 Gm13612-201ENSMUST00000119276 390 ntBASIC13.21□□□□□ -0.29
Rnf135Q9CWS1 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf135Q9CWS1 Gm13123-201ENSMUST00000122173 492 ntBASIC13.21□□□□□ -0.29
Rnf135Q9CWS1 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf135Q9CWS1 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.21□□□□□ -0.29
Rnf135Q9CWS1 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rnf135Q9CWS1 Proscos-202ENSMUST00000178990 666 ntBASIC13.21□□□□□ -0.29
Rnf135Q9CWS1 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms