Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Gm13859-201ENSMUST00000119936 1423 ntBASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Gm11543-201ENSMUST00000120758 370 ntBASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Gm23634-201ENSMUST00000175071 91 ntBASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Gm6550-201ENSMUST00000187574 993 ntBASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Ighv1-25-201ENSMUST00000195638 345 ntBASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Mir125a-201ENSMUST00000083545 68 ntBASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Gm43931-201ENSMUST00000204817 2870 ntBASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chchd1Q9CQA6 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chchd1Q9CQA6 Gm43963-201ENSMUST00000203466 2488 ntBASIC9.49□□□□□ -0.89
Chchd1Q9CQA6 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chchd1Q9CQA6 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chchd1Q9CQA6 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chchd1Q9CQA6 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Chchd1Q9CQA6 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC9.49□□□□□ -0.89
Chchd1Q9CQA6 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Chchd1Q9CQA6 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC9.49□□□□□ -0.89
Chchd1Q9CQA6 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms