Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.03□□□□□ -0.48
Ska1Q9CPV1 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ska1Q9CPV1 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.03□□□□□ -0.48
Ska1Q9CPV1 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ska1Q9CPV1 Gm29608-201ENSMUST00000190444 463 ntBASIC12.03□□□□□ -0.48
Ska1Q9CPV1 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.03□□□□□ -0.48
Ska1Q9CPV1 Gm44124-201ENSMUST00000204159 472 ntBASIC12.03□□□□□ -0.48
Ska1Q9CPV1 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.03□□□□□ -0.48
Ska1Q9CPV1 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.03□□□□□ -0.48
Ska1Q9CPV1 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ska1Q9CPV1 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ska1Q9CPV1 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ska1Q9CPV1 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ska1Q9CPV1 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ska1Q9CPV1 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ska1Q9CPV1 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.03□□□□□ -0.48
Ska1Q9CPV1 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Ska1Q9CPV1 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ska1Q9CPV1 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ska1Q9CPV1 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ska1Q9CPV1 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ska1Q9CPV1 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ska1Q9CPV1 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ska1Q9CPV1 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.03□□□□□ -0.48
Ska1Q9CPV1 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ska1Q9CPV1 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ska1Q9CPV1 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.03□□□□□ -0.48
Ska1Q9CPV1 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ska1Q9CPV1 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ska1Q9CPV1 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ska1Q9CPV1 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ska1Q9CPV1 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ska1Q9CPV1 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ska1Q9CPV1 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ska1Q9CPV1 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ska1Q9CPV1 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ska1Q9CPV1 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ska1Q9CPV1 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ska1Q9CPV1 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ska1Q9CPV1 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Ska1Q9CPV1 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ska1Q9CPV1 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ska1Q9CPV1 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ska1Q9CPV1 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ska1Q9CPV1 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.02□□□□□ -0.49
Ska1Q9CPV1 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.02□□□□□ -0.49
Ska1Q9CPV1 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.02□□□□□ -0.49
Ska1Q9CPV1 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.02□□□□□ -0.49
Ska1Q9CPV1 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Ska1Q9CPV1 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ska1Q9CPV1 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ska1Q9CPV1 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ska1Q9CPV1 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ska1Q9CPV1 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ska1Q9CPV1 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ska1Q9CPV1 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ska1Q9CPV1 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ska1Q9CPV1 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.02□□□□□ -0.49
Ska1Q9CPV1 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ska1Q9CPV1 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ska1Q9CPV1 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ska1Q9CPV1 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ska1Q9CPV1 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ska1Q9CPV1 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.02□□□□□ -0.49
Ska1Q9CPV1 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.01□□□□□ -0.49
Ska1Q9CPV1 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ska1Q9CPV1 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ska1Q9CPV1 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ska1Q9CPV1 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ska1Q9CPV1 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Ska1Q9CPV1 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Ska1Q9CPV1 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Ska1Q9CPV1 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ska1Q9CPV1 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Ska1Q9CPV1 Gm6447-201ENSMUST00000118905 835 ntBASIC12.01□□□□□ -0.49
Ska1Q9CPV1 Gm12341-201ENSMUST00000119724 503 ntBASIC12.01□□□□□ -0.49
Ska1Q9CPV1 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Ska1Q9CPV1 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.01□□□□□ -0.49
Ska1Q9CPV1 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.01□□□□□ -0.49
Ska1Q9CPV1 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ska1Q9CPV1 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ska1Q9CPV1 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ska1Q9CPV1 Daam2-202ENSMUST00000224595 1926 ntBASIC12.01□□□□□ -0.49
Ska1Q9CPV1 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ska1Q9CPV1 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Ska1Q9CPV1 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ska1Q9CPV1 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.49
Ska1Q9CPV1 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ska1Q9CPV1 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Ska1Q9CPV1 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Ska1Q9CPV1 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ska1Q9CPV1 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12□□□□□ -0.49
Ska1Q9CPV1 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ska1Q9CPV1 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12□□□□□ -0.49
Ska1Q9CPV1 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Ska1Q9CPV1 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Ska1Q9CPV1 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12□□□□□ -0.49
Ska1Q9CPV1 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ska1Q9CPV1 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ska1Q9CPV1 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms