Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Nkx6-1Q99MA9 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx6-1Q99MA9 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx6-1Q99MA9 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx6-1Q99MA9 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx6-1Q99MA9 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx6-1Q99MA9 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx6-1Q99MA9 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.94□□□□□ -0.5
Nkx6-1Q99MA9 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Nkx6-1Q99MA9 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx6-1Q99MA9 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx6-1Q99MA9 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 Gm14999-201ENSMUST00000121039 624 ntBASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 Gm24845-201ENSMUST00000158034 109 ntBASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 Gm37666-201ENSMUST00000194110 866 ntBASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 Gm44551-201ENSMUST00000208804 171 ntBASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 AC135469.1-201ENSMUST00000225984 772 ntBASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Nkx6-1Q99MA9 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx6-1Q99MA9 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx6-1Q99MA9 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx6-1Q99MA9 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx6-1Q99MA9 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx6-1Q99MA9 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx6-1Q99MA9 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Nkx6-1Q99MA9 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx6-1Q99MA9 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Nkx6-1Q99MA9 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.92□□□□□ -0.5
Nkx6-1Q99MA9 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx6-1Q99MA9 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.92□□□□□ -0.5
Nkx6-1Q99MA9 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Nkx6-1Q99MA9 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Nkx6-1Q99MA9 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.92□□□□□ -0.5
Nkx6-1Q99MA9 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Nkx6-1Q99MA9 Gm11667-201ENSMUST00000119828 486 ntBASIC11.92□□□□□ -0.5
Nkx6-1Q99MA9 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx6-1Q99MA9 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx6-1Q99MA9 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.92□□□□□ -0.5
Nkx6-1Q99MA9 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.92□□□□□ -0.5
Nkx6-1Q99MA9 Gm27627-201ENSMUST00000183644 150 ntBASIC11.92□□□□□ -0.5
Nkx6-1Q99MA9 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.92□□□□□ -0.5
Nkx6-1Q99MA9 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC11.92□□□□□ -0.5
Nkx6-1Q99MA9 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.92□□□□□ -0.5
Nkx6-1Q99MA9 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.92□□□□□ -0.5
Nkx6-1Q99MA9 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.92□□□□□ -0.5
Nkx6-1Q99MA9 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx6-1Q99MA9 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx6-1Q99MA9 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx6-1Q99MA9 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx6-1Q99MA9 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx6-1Q99MA9 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms