Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cstf3Q99LI7 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cstf3Q99LI7 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cstf3Q99LI7 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Cstf3Q99LI7 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.29□□□□□ -0.44
Cstf3Q99LI7 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cstf3Q99LI7 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cstf3Q99LI7 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cstf3Q99LI7 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cstf3Q99LI7 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cstf3Q99LI7 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cstf3Q99LI7 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cstf3Q99LI7 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cstf3Q99LI7 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Cstf3Q99LI7 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.29□□□□□ -0.44
Cstf3Q99LI7 Gm8810-201ENSMUST00000172895 754 ntBASIC12.29□□□□□ -0.44
Cstf3Q99LI7 Gm6244-201ENSMUST00000178732 841 ntBASIC12.29□□□□□ -0.44
Cstf3Q99LI7 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Cstf3Q99LI7 Mir339-201ENSMUST00000083659 96 ntBASIC12.29□□□□□ -0.44
Cstf3Q99LI7 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cstf3Q99LI7 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.29□□□□□ -0.44
Cstf3Q99LI7 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.29□□□□□ -0.44
Cstf3Q99LI7 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cstf3Q99LI7 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cstf3Q99LI7 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.29□□□□□ -0.44
Cstf3Q99LI7 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.29□□□□□ -0.44
Cstf3Q99LI7 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Cstf3Q99LI7 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.29□□□□□ -0.44
Cstf3Q99LI7 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cstf3Q99LI7 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cstf3Q99LI7 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Cstf3Q99LI7 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cstf3Q99LI7 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cstf3Q99LI7 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cstf3Q99LI7 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.29□□□□□ -0.44
Cstf3Q99LI7 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.28□□□□□ -0.44
Cstf3Q99LI7 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.28□□□□□ -0.44
Cstf3Q99LI7 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cstf3Q99LI7 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Cstf3Q99LI7 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cstf3Q99LI7 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.28□□□□□ -0.44
Cstf3Q99LI7 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Cstf3Q99LI7 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cstf3Q99LI7 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cstf3Q99LI7 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cstf3Q99LI7 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cstf3Q99LI7 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Cstf3Q99LI7 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Cstf3Q99LI7 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Cstf3Q99LI7 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cstf3Q99LI7 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Cstf3Q99LI7 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cstf3Q99LI7 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cstf3Q99LI7 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cstf3Q99LI7 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cstf3Q99LI7 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cstf3Q99LI7 Gm8805-201ENSMUST00000117848 313 ntBASIC12.28□□□□□ -0.44
Cstf3Q99LI7 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.28□□□□□ -0.44
Cstf3Q99LI7 Gm14704-201ENSMUST00000120300 874 ntBASIC12.28□□□□□ -0.44
Cstf3Q99LI7 Gm16479-201ENSMUST00000121706 932 ntBASIC12.28□□□□□ -0.44
Cstf3Q99LI7 Gm2231-201ENSMUST00000125661 612 ntBASIC12.28□□□□□ -0.44
Cstf3Q99LI7 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cstf3Q99LI7 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.28□□□□□ -0.44
Cstf3Q99LI7 Gm24196-201ENSMUST00000179161 110 ntBASIC12.28□□□□□ -0.44
Cstf3Q99LI7 Gm37497-201ENSMUST00000195830 798 ntBASIC12.28□□□□□ -0.44
Cstf3Q99LI7 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.28□□□□□ -0.44
Cstf3Q99LI7 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.28□□□□□ -0.44
Cstf3Q99LI7 Gm8099-201ENSMUST00000200510 742 ntBASIC12.28□□□□□ -0.44
Cstf3Q99LI7 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cstf3Q99LI7 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.28□□□□□ -0.44
Cstf3Q99LI7 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.28□□□□□ -0.44
Cstf3Q99LI7 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cstf3Q99LI7 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.28□□□□□ -0.44
Cstf3Q99LI7 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cstf3Q99LI7 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cstf3Q99LI7 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cstf3Q99LI7 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cstf3Q99LI7 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cstf3Q99LI7 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cstf3Q99LI7 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Cstf3Q99LI7 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cstf3Q99LI7 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cstf3Q99LI7 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Cstf3Q99LI7 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cstf3Q99LI7 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cstf3Q99LI7 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.28□□□□□ -0.44
Cstf3Q99LI7 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cstf3Q99LI7 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cstf3Q99LI7 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Cstf3Q99LI7 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cstf3Q99LI7 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Cstf3Q99LI7 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cstf3Q99LI7 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cstf3Q99LI7 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.27□□□□□ -0.44
Cstf3Q99LI7 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cstf3Q99LI7 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cstf3Q99LI7 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cstf3Q99LI7 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cstf3Q99LI7 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cstf3Q99LI7 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms