Protein–RNA interactions for Protein: Q921M3

Sf3b3, Splicing factor 3B subunit 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b3Q921M3 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3b3Q921M3 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC15.2■□□□□ 0.02
Sf3b3Q921M3 Gm45118-201ENSMUST00000208928 825 ntBASIC15.2■□□□□ 0.02
Sf3b3Q921M3 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC15.2■□□□□ 0.02
Sf3b3Q921M3 CT009718.3-201ENSMUST00000221116 367 ntBASIC15.2■□□□□ 0.02
Sf3b3Q921M3 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3b3Q921M3 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3b3Q921M3 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3b3Q921M3 Gm10176-201ENSMUST00000159707 2264 ntBASIC15.2■□□□□ 0.02
Sf3b3Q921M3 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3b3Q921M3 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3b3Q921M3 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3b3Q921M3 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3b3Q921M3 Gm44851-201ENSMUST00000205735 2309 ntBASIC15.2■□□□□ 0.02
Sf3b3Q921M3 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3b3Q921M3 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC15.2■□□□□ 0.02
Sf3b3Q921M3 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Sf3b3Q921M3 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3b3Q921M3 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3b3Q921M3 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sf3b3Q921M3 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sf3b3Q921M3 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sf3b3Q921M3 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sf3b3Q921M3 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sf3b3Q921M3 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sf3b3Q921M3 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sf3b3Q921M3 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sf3b3Q921M3 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sf3b3Q921M3 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC15.19■□□□□ 0.02
Sf3b3Q921M3 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sf3b3Q921M3 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sf3b3Q921M3 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC15.19■□□□□ 0.02
Sf3b3Q921M3 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC15.19■□□□□ 0.02
Sf3b3Q921M3 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC15.19■□□□□ 0.02
Sf3b3Q921M3 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC15.19■□□□□ 0.02
Sf3b3Q921M3 Gm9211-201ENSMUST00000182882 975 ntBASIC15.19■□□□□ 0.02
Sf3b3Q921M3 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC15.19■□□□□ 0.02
Sf3b3Q921M3 Gm9555-201ENSMUST00000200908 583 ntBASIC15.19■□□□□ 0.02
Sf3b3Q921M3 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sf3b3Q921M3 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sf3b3Q921M3 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC15.19■□□□□ 0.02
Sf3b3Q921M3 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sf3b3Q921M3 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Sf3b3Q921M3 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sf3b3Q921M3 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sf3b3Q921M3 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sf3b3Q921M3 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sf3b3Q921M3 AC123619.2-202ENSMUST00000225097 1568 ntBASIC15.19■□□□□ 0.02
Sf3b3Q921M3 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sf3b3Q921M3 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
Sf3b3Q921M3 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sf3b3Q921M3 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sf3b3Q921M3 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sf3b3Q921M3 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sf3b3Q921M3 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sf3b3Q921M3 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sf3b3Q921M3 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sf3b3Q921M3 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Sf3b3Q921M3 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.18■□□□□ 0.02
Sf3b3Q921M3 AC151895.1-201ENSMUST00000219025 1742 ntBASIC15.18■□□□□ 0.02
Sf3b3Q921M3 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sf3b3Q921M3 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sf3b3Q921M3 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
Sf3b3Q921M3 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sf3b3Q921M3 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sf3b3Q921M3 Gm22133-201ENSMUST00000102082 109 ntBASIC15.18■□□□□ 0.02
Sf3b3Q921M3 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Sf3b3Q921M3 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sf3b3Q921M3 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Sf3b3Q921M3 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sf3b3Q921M3 Gm13611-201ENSMUST00000118269 318 ntBASIC15.18■□□□□ 0.02
Sf3b3Q921M3 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC15.18■□□□□ 0.02
Sf3b3Q921M3 Mir1943-201ENSMUST00000158276 73 ntBASIC15.18■□□□□ 0.02
Sf3b3Q921M3 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sf3b3Q921M3 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC15.18■□□□□ 0.02
Sf3b3Q921M3 Gm7207-201ENSMUST00000211575 1067 ntBASIC15.18■□□□□ 0.02
Sf3b3Q921M3 Gm5369-201ENSMUST00000217499 588 ntBASIC15.18■□□□□ 0.02
Sf3b3Q921M3 Gm18556-201ENSMUST00000219748 1031 ntBASIC15.18■□□□□ 0.02
Sf3b3Q921M3 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sf3b3Q921M3 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sf3b3Q921M3 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sf3b3Q921M3 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sf3b3Q921M3 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sf3b3Q921M3 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sf3b3Q921M3 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sf3b3Q921M3 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sf3b3Q921M3 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sf3b3Q921M3 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Sf3b3Q921M3 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Sf3b3Q921M3 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Sf3b3Q921M3 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sf3b3Q921M3 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sf3b3Q921M3 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Sf3b3Q921M3 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sf3b3Q921M3 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Sf3b3Q921M3 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC15.17■□□□□ 0.02
Sf3b3Q921M3 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.17■□□□□ 0.02
Sf3b3Q921M3 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sf3b3Q921M3 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sf3b3Q921M3 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms