Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb2Q91Y00 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Pcdhb2Q91Y00 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb2Q91Y00 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb2Q91Y00 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb2Q91Y00 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb2Q91Y00 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.52□□□□□ -0.24
Pcdhb2Q91Y00 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb2Q91Y00 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb2Q91Y00 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb2Q91Y00 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
Pcdhb2Q91Y00 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb2Q91Y00 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Pcdhb2Q91Y00 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb2Q91Y00 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13.52□□□□□ -0.25
Pcdhb2Q91Y00 Gm11793-201ENSMUST00000120433 981 ntBASIC13.52□□□□□ -0.25
Pcdhb2Q91Y00 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.52□□□□□ -0.25
Pcdhb2Q91Y00 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.52□□□□□ -0.25
Pcdhb2Q91Y00 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb2Q91Y00 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.52□□□□□ -0.25
Pcdhb2Q91Y00 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.52□□□□□ -0.25
Pcdhb2Q91Y00 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.52□□□□□ -0.25
Pcdhb2Q91Y00 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.52□□□□□ -0.25
Pcdhb2Q91Y00 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.52□□□□□ -0.25
Pcdhb2Q91Y00 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC13.52□□□□□ -0.25
Pcdhb2Q91Y00 Gm5850-201ENSMUST00000192923 1206 ntBASIC13.52□□□□□ -0.25
Pcdhb2Q91Y00 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.52□□□□□ -0.25
Pcdhb2Q91Y00 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb2Q91Y00 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Pcdhb2Q91Y00 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.52□□□□□ -0.25
Pcdhb2Q91Y00 Gm10608-202ENSMUST00000213924 676 ntBASIC13.52□□□□□ -0.25
Pcdhb2Q91Y00 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.52□□□□□ -0.25
Pcdhb2Q91Y00 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.52□□□□□ -0.25
Pcdhb2Q91Y00 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb2Q91Y00 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb2Q91Y00 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb2Q91Y00 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Pcdhb2Q91Y00 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.52□□□□□ -0.25
Pcdhb2Q91Y00 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb2Q91Y00 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb2Q91Y00 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Pcdhb2Q91Y00 AC154849.3-201ENSMUST00000223733 1660 ntBASIC13.52□□□□□ -0.25
Pcdhb2Q91Y00 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Pcdhb2Q91Y00 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb2Q91Y00 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb2Q91Y00 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb2Q91Y00 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb2Q91Y00 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb2Q91Y00 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb2Q91Y00 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb2Q91Y00 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb2Q91Y00 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb2Q91Y00 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb2Q91Y00 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb2Q91Y00 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb2Q91Y00 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb2Q91Y00 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.51□□□□□ -0.25
Pcdhb2Q91Y00 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb2Q91Y00 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb2Q91Y00 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.51□□□□□ -0.25
Pcdhb2Q91Y00 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.51□□□□□ -0.25
Pcdhb2Q91Y00 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.51□□□□□ -0.25
Pcdhb2Q91Y00 Gm24548-201ENSMUST00000158650 108 ntBASIC13.51□□□□□ -0.25
Pcdhb2Q91Y00 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.51□□□□□ -0.25
Pcdhb2Q91Y00 Mospd4-201ENSMUST00000180618 576 ntBASIC13.51□□□□□ -0.25
Pcdhb2Q91Y00 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb2Q91Y00 Gm36991-201ENSMUST00000191800 648 ntBASIC13.51□□□□□ -0.25
Pcdhb2Q91Y00 Gm37489-201ENSMUST00000191883 159 ntBASIC13.51□□□□□ -0.25
Pcdhb2Q91Y00 Gm38266-201ENSMUST00000194931 421 ntBASIC13.51□□□□□ -0.25
Pcdhb2Q91Y00 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC13.51□□□□□ -0.25
Pcdhb2Q91Y00 Gm45331-201ENSMUST00000209868 554 ntBASIC13.51□□□□□ -0.25
Pcdhb2Q91Y00 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.51□□□□□ -0.25
Pcdhb2Q91Y00 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.51□□□□□ -0.25
Pcdhb2Q91Y00 Gm18935-201ENSMUST00000212692 664 ntBASIC13.51□□□□□ -0.25
Pcdhb2Q91Y00 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb2Q91Y00 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb2Q91Y00 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.51□□□□□ -0.25
Pcdhb2Q91Y00 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb2Q91Y00 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb2Q91Y00 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb2Q91Y00 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb2Q91Y00 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb2Q91Y00 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb2Q91Y00 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Pcdhb2Q91Y00 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb2Q91Y00 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb2Q91Y00 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb2Q91Y00 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb2Q91Y00 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb2Q91Y00 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb2Q91Y00 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb2Q91Y00 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.5□□□□□ -0.25
Pcdhb2Q91Y00 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.5□□□□□ -0.25
Pcdhb2Q91Y00 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb2Q91Y00 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb2Q91Y00 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb2Q91Y00 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.5□□□□□ -0.25
Pcdhb2Q91Y00 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb2Q91Y00 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb2Q91Y00 Gm11661-201ENSMUST00000121761 1327 ntBASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms