Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdhb4Q91XZ6 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb4Q91XZ6 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb4Q91XZ6 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb4Q91XZ6 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb4Q91XZ6 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.65□□□□□ -0.38
Pcdhb4Q91XZ6 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Pcdhb4Q91XZ6 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb4Q91XZ6 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Pcdhb4Q91XZ6 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb4Q91XZ6 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb4Q91XZ6 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb4Q91XZ6 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb4Q91XZ6 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Pcdhb4Q91XZ6 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.65□□□□□ -0.38
Pcdhb4Q91XZ6 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Pcdhb4Q91XZ6 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Pcdhb4Q91XZ6 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.65□□□□□ -0.38
Pcdhb4Q91XZ6 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Pcdhb4Q91XZ6 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.65□□□□□ -0.38
Pcdhb4Q91XZ6 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.65□□□□□ -0.38
Pcdhb4Q91XZ6 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.65□□□□□ -0.38
Pcdhb4Q91XZ6 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb4Q91XZ6 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.65□□□□□ -0.38
Pcdhb4Q91XZ6 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb4Q91XZ6 Gm9908-201ENSMUST00000211534 448 ntBASIC12.65□□□□□ -0.38
Pcdhb4Q91XZ6 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Pcdhb4Q91XZ6 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.65□□□□□ -0.38
Pcdhb4Q91XZ6 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb4Q91XZ6 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb4Q91XZ6 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb4Q91XZ6 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb4Q91XZ6 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb4Q91XZ6 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Pcdhb4Q91XZ6 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Pcdhb4Q91XZ6 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Pcdhb4Q91XZ6 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Pcdhb4Q91XZ6 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Pcdhb4Q91XZ6 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.65□□□□□ -0.38
Pcdhb4Q91XZ6 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb4Q91XZ6 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Pcdhb4Q91XZ6 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Pcdhb4Q91XZ6 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb4Q91XZ6 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb4Q91XZ6 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb4Q91XZ6 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdhb4Q91XZ6 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Pcdhb4Q91XZ6 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.65□□□□□ -0.39
Pcdhb4Q91XZ6 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb4Q91XZ6 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.64□□□□□ -0.39
Pcdhb4Q91XZ6 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb4Q91XZ6 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb4Q91XZ6 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb4Q91XZ6 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Pcdhb4Q91XZ6 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.64□□□□□ -0.39
Pcdhb4Q91XZ6 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb4Q91XZ6 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb4Q91XZ6 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.64□□□□□ -0.39
Pcdhb4Q91XZ6 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb4Q91XZ6 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb4Q91XZ6 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.64□□□□□ -0.39
Pcdhb4Q91XZ6 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.64□□□□□ -0.39
Pcdhb4Q91XZ6 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Pcdhb4Q91XZ6 Gm13612-201ENSMUST00000119276 390 ntBASIC12.64□□□□□ -0.39
Pcdhb4Q91XZ6 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Pcdhb4Q91XZ6 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb4Q91XZ6 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.64□□□□□ -0.39
Pcdhb4Q91XZ6 Gm7287-201ENSMUST00000205267 602 ntBASIC12.64□□□□□ -0.39
Pcdhb4Q91XZ6 Gm45384-201ENSMUST00000210451 277 ntBASIC12.64□□□□□ -0.39
Pcdhb4Q91XZ6 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.64□□□□□ -0.39
Pcdhb4Q91XZ6 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb4Q91XZ6 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Pcdhb4Q91XZ6 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb4Q91XZ6 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb4Q91XZ6 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb4Q91XZ6 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Pcdhb4Q91XZ6 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb4Q91XZ6 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.64□□□□□ -0.39
Pcdhb4Q91XZ6 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb4Q91XZ6 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb4Q91XZ6 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.64□□□□□ -0.39
Pcdhb4Q91XZ6 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb4Q91XZ6 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.64□□□□□ -0.39
Pcdhb4Q91XZ6 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb4Q91XZ6 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhb4Q91XZ6 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb4Q91XZ6 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb4Q91XZ6 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.63□□□□□ -0.39
Pcdhb4Q91XZ6 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb4Q91XZ6 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb4Q91XZ6 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb4Q91XZ6 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Pcdhb4Q91XZ6 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Pcdhb4Q91XZ6 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb4Q91XZ6 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb4Q91XZ6 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Pcdhb4Q91XZ6 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb4Q91XZ6 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Pcdhb4Q91XZ6 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.63□□□□□ -0.39
Pcdhb4Q91XZ6 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms