Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga3Q91XY5 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga3Q91XY5 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga3Q91XY5 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga3Q91XY5 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga3Q91XY5 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga3Q91XY5 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga3Q91XY5 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga3Q91XY5 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga3Q91XY5 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga3Q91XY5 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga3Q91XY5 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga3Q91XY5 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga3Q91XY5 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga3Q91XY5 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.35□□□□□ -0.59
Pcdhga3Q91XY5 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga3Q91XY5 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga3Q91XY5 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga3Q91XY5 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga3Q91XY5 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga3Q91XY5 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.35□□□□□ -0.59
Pcdhga3Q91XY5 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Pcdhga3Q91XY5 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga3Q91XY5 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga3Q91XY5 Gm11618-201ENSMUST00000117946 267 ntBASIC11.35□□□□□ -0.59
Pcdhga3Q91XY5 Gm11814-201ENSMUST00000119515 929 ntBASIC11.35□□□□□ -0.59
Pcdhga3Q91XY5 Gm10156-201ENSMUST00000122364 462 ntBASIC11.35□□□□□ -0.59
Pcdhga3Q91XY5 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.35□□□□□ -0.59
Pcdhga3Q91XY5 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
Pcdhga3Q91XY5 Gm27486-201ENSMUST00000184923 80 ntBASIC11.35□□□□□ -0.59
Pcdhga3Q91XY5 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.35□□□□□ -0.59
Pcdhga3Q91XY5 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.35□□□□□ -0.59
Pcdhga3Q91XY5 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC11.35□□□□□ -0.59
Pcdhga3Q91XY5 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.35□□□□□ -0.59
Pcdhga3Q91XY5 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga3Q91XY5 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga3Q91XY5 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Pcdhga3Q91XY5 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga3Q91XY5 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga3Q91XY5 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga3Q91XY5 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga3Q91XY5 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga3Q91XY5 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.35□□□□□ -0.59
Pcdhga3Q91XY5 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga3Q91XY5 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga3Q91XY5 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Pcdhga3Q91XY5 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.35□□□□□ -0.59
Pcdhga3Q91XY5 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga3Q91XY5 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Pcdhga3Q91XY5 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga3Q91XY5 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga3Q91XY5 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga3Q91XY5 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga3Q91XY5 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga3Q91XY5 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Pcdhga3Q91XY5 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga3Q91XY5 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.35□□□□□ -0.59
Pcdhga3Q91XY5 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga3Q91XY5 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 Proscos-202ENSMUST00000178990 666 ntBASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 Gm7653-201ENSMUST00000214567 508 ntBASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 Gm8598-201ENSMUST00000221184 836 ntBASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms