Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Slf1Q8R3P9 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Slf1Q8R3P9 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Slf1Q8R3P9 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Slf1Q8R3P9 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.84□□□□□ -0.35
Slf1Q8R3P9 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Slf1Q8R3P9 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Slf1Q8R3P9 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Slf1Q8R3P9 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Slf1Q8R3P9 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Slf1Q8R3P9 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Slf1Q8R3P9 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.84□□□□□ -0.35
Slf1Q8R3P9 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Slf1Q8R3P9 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Slf1Q8R3P9 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Slf1Q8R3P9 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Slf1Q8R3P9 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Slf1Q8R3P9 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Slf1Q8R3P9 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.84□□□□□ -0.35
Slf1Q8R3P9 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Slf1Q8R3P9 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.84□□□□□ -0.35
Slf1Q8R3P9 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.84□□□□□ -0.35
Slf1Q8R3P9 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Slf1Q8R3P9 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Slf1Q8R3P9 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Slf1Q8R3P9 Gm29667-201ENSMUST00000190817 490 ntBASIC12.84□□□□□ -0.35
Slf1Q8R3P9 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Slf1Q8R3P9 Gm19931-201ENSMUST00000198920 368 ntBASIC12.84□□□□□ -0.35
Slf1Q8R3P9 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.84□□□□□ -0.35
Slf1Q8R3P9 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Slf1Q8R3P9 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Slf1Q8R3P9 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Slf1Q8R3P9 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Slf1Q8R3P9 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Slf1Q8R3P9 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Slf1Q8R3P9 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.84□□□□□ -0.35
Slf1Q8R3P9 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Slf1Q8R3P9 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Slf1Q8R3P9 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Slf1Q8R3P9 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.84□□□□□ -0.35
Slf1Q8R3P9 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Slf1Q8R3P9 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Slf1Q8R3P9 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.35
Slf1Q8R3P9 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Slf1Q8R3P9 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.83□□□□□ -0.35
Slf1Q8R3P9 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Slf1Q8R3P9 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.83□□□□□ -0.35
Slf1Q8R3P9 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Slf1Q8R3P9 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Slf1Q8R3P9 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slf1Q8R3P9 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slf1Q8R3P9 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.83□□□□□ -0.36
Slf1Q8R3P9 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slf1Q8R3P9 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Slf1Q8R3P9 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Slf1Q8R3P9 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slf1Q8R3P9 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Slf1Q8R3P9 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slf1Q8R3P9 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slf1Q8R3P9 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Slf1Q8R3P9 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.83□□□□□ -0.36
Slf1Q8R3P9 Gm14719-201ENSMUST00000121891 340 ntBASIC12.83□□□□□ -0.36
Slf1Q8R3P9 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.83□□□□□ -0.36
Slf1Q8R3P9 Gm21854-201ENSMUST00000179901 471 ntBASIC12.83□□□□□ -0.36
Slf1Q8R3P9 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.36
Slf1Q8R3P9 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.83□□□□□ -0.36
Slf1Q8R3P9 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Slf1Q8R3P9 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.83□□□□□ -0.36
Slf1Q8R3P9 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.83□□□□□ -0.36
Slf1Q8R3P9 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.83□□□□□ -0.36
Slf1Q8R3P9 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slf1Q8R3P9 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slf1Q8R3P9 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.83□□□□□ -0.36
Slf1Q8R3P9 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slf1Q8R3P9 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slf1Q8R3P9 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slf1Q8R3P9 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.83□□□□□ -0.36
Slf1Q8R3P9 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Slf1Q8R3P9 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slf1Q8R3P9 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.83□□□□□ -0.36
Slf1Q8R3P9 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slf1Q8R3P9 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slf1Q8R3P9 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.83□□□□□ -0.36
Slf1Q8R3P9 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slf1Q8R3P9 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Slf1Q8R3P9 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.83□□□□□ -0.36
Slf1Q8R3P9 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Slf1Q8R3P9 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.83□□□□□ -0.36
Slf1Q8R3P9 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Slf1Q8R3P9 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slf1Q8R3P9 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slf1Q8R3P9 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slf1Q8R3P9 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slf1Q8R3P9 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slf1Q8R3P9 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Slf1Q8R3P9 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Slf1Q8R3P9 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Slf1Q8R3P9 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.82□□□□□ -0.36
Slf1Q8R3P9 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.82□□□□□ -0.36
Slf1Q8R3P9 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms