Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nudcd3Q8R1N4 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
Nudcd3Q8R1N4 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Nudcd3Q8R1N4 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nudcd3Q8R1N4 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Nudcd3Q8R1N4 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nudcd3Q8R1N4 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nudcd3Q8R1N4 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.69□□□□□ -0.38
Nudcd3Q8R1N4 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nudcd3Q8R1N4 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nudcd3Q8R1N4 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nudcd3Q8R1N4 Gm13689-201ENSMUST00000119360 685 ntBASIC12.69□□□□□ -0.38
Nudcd3Q8R1N4 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.69□□□□□ -0.38
Nudcd3Q8R1N4 Gm9630-201ENSMUST00000178304 885 ntBASIC12.69□□□□□ -0.38
Nudcd3Q8R1N4 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.69□□□□□ -0.38
Nudcd3Q8R1N4 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nudcd3Q8R1N4 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nudcd3Q8R1N4 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.69□□□□□ -0.38
Nudcd3Q8R1N4 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nudcd3Q8R1N4 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Nudcd3Q8R1N4 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Nudcd3Q8R1N4 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.69□□□□□ -0.38
Nudcd3Q8R1N4 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nudcd3Q8R1N4 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nudcd3Q8R1N4 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nudcd3Q8R1N4 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nudcd3Q8R1N4 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nudcd3Q8R1N4 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nudcd3Q8R1N4 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Nudcd3Q8R1N4 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.69□□□□□ -0.38
Nudcd3Q8R1N4 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nudcd3Q8R1N4 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nudcd3Q8R1N4 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Nudcd3Q8R1N4 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nudcd3Q8R1N4 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nudcd3Q8R1N4 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Nudcd3Q8R1N4 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Nudcd3Q8R1N4 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nudcd3Q8R1N4 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nudcd3Q8R1N4 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nudcd3Q8R1N4 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Nudcd3Q8R1N4 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Nudcd3Q8R1N4 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nudcd3Q8R1N4 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nudcd3Q8R1N4 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nudcd3Q8R1N4 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Nudcd3Q8R1N4 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Nudcd3Q8R1N4 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.68□□□□□ -0.38
Nudcd3Q8R1N4 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nudcd3Q8R1N4 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nudcd3Q8R1N4 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.68□□□□□ -0.38
Nudcd3Q8R1N4 Gm15371-201ENSMUST00000117057 784 ntBASIC12.68□□□□□ -0.38
Nudcd3Q8R1N4 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nudcd3Q8R1N4 Gm27838-201ENSMUST00000184829 128 ntBASIC12.68□□□□□ -0.38
Nudcd3Q8R1N4 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nudcd3Q8R1N4 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.68□□□□□ -0.38
Nudcd3Q8R1N4 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nudcd3Q8R1N4 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Nudcd3Q8R1N4 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nudcd3Q8R1N4 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nudcd3Q8R1N4 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nudcd3Q8R1N4 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Nudcd3Q8R1N4 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nudcd3Q8R1N4 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nudcd3Q8R1N4 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nudcd3Q8R1N4 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nudcd3Q8R1N4 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nudcd3Q8R1N4 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nudcd3Q8R1N4 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nudcd3Q8R1N4 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nudcd3Q8R1N4 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nudcd3Q8R1N4 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nudcd3Q8R1N4 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nudcd3Q8R1N4 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.67□□□□□ -0.38
Nudcd3Q8R1N4 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nudcd3Q8R1N4 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nudcd3Q8R1N4 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nudcd3Q8R1N4 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nudcd3Q8R1N4 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nudcd3Q8R1N4 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nudcd3Q8R1N4 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Nudcd3Q8R1N4 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.67□□□□□ -0.38
Nudcd3Q8R1N4 Gm16202-201ENSMUST00000117532 544 ntBASIC12.67□□□□□ -0.38
Nudcd3Q8R1N4 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.67□□□□□ -0.38
Nudcd3Q8R1N4 Gm15487-201ENSMUST00000122373 465 ntBASIC12.67□□□□□ -0.38
Nudcd3Q8R1N4 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nudcd3Q8R1N4 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.67□□□□□ -0.38
Nudcd3Q8R1N4 Gm5354-201ENSMUST00000182417 973 ntBASIC12.67□□□□□ -0.38
Nudcd3Q8R1N4 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.67□□□□□ -0.38
Nudcd3Q8R1N4 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.67□□□□□ -0.38
Nudcd3Q8R1N4 Gm19184-201ENSMUST00000196798 928 ntBASIC12.67□□□□□ -0.38
Nudcd3Q8R1N4 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.67□□□□□ -0.38
Nudcd3Q8R1N4 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nudcd3Q8R1N4 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Nudcd3Q8R1N4 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nudcd3Q8R1N4 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nudcd3Q8R1N4 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.67□□□□□ -0.38
Nudcd3Q8R1N4 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nudcd3Q8R1N4 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.67□□□□□ -0.38
Nudcd3Q8R1N4 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms