Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vopp1Q8R1C3 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vopp1Q8R1C3 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vopp1Q8R1C3 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vopp1Q8R1C3 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vopp1Q8R1C3 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vopp1Q8R1C3 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vopp1Q8R1C3 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vopp1Q8R1C3 Gm22133-201ENSMUST00000102082 109 ntBASIC13.28□□□□□ -0.28
Vopp1Q8R1C3 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vopp1Q8R1C3 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC13.28□□□□□ -0.28
Vopp1Q8R1C3 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vopp1Q8R1C3 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC13.28□□□□□ -0.28
Vopp1Q8R1C3 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC13.28□□□□□ -0.28
Vopp1Q8R1C3 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC13.28□□□□□ -0.28
Vopp1Q8R1C3 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC13.28□□□□□ -0.28
Vopp1Q8R1C3 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vopp1Q8R1C3 Gm28071-201ENSMUST00000190355 478 ntBASIC13.28□□□□□ -0.28
Vopp1Q8R1C3 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC13.28□□□□□ -0.28
Vopp1Q8R1C3 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC13.28□□□□□ -0.28
Vopp1Q8R1C3 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Vopp1Q8R1C3 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.28□□□□□ -0.28
Vopp1Q8R1C3 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vopp1Q8R1C3 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vopp1Q8R1C3 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vopp1Q8R1C3 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Vopp1Q8R1C3 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Vopp1Q8R1C3 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vopp1Q8R1C3 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vopp1Q8R1C3 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vopp1Q8R1C3 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vopp1Q8R1C3 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vopp1Q8R1C3 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vopp1Q8R1C3 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vopp1Q8R1C3 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
Vopp1Q8R1C3 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Vopp1Q8R1C3 Gm37131-201ENSMUST00000192502 1561 ntBASIC13.28□□□□□ -0.28
Vopp1Q8R1C3 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vopp1Q8R1C3 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vopp1Q8R1C3 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
Vopp1Q8R1C3 Gm28719-201ENSMUST00000187779 1757 ntBASIC13.27□□□□□ -0.28
Vopp1Q8R1C3 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vopp1Q8R1C3 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Vopp1Q8R1C3 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vopp1Q8R1C3 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vopp1Q8R1C3 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
Vopp1Q8R1C3 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vopp1Q8R1C3 Gm26286-201ENSMUST00000104166 134 ntBASIC13.27□□□□□ -0.29
Vopp1Q8R1C3 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Vopp1Q8R1C3 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC13.27□□□□□ -0.29
Vopp1Q8R1C3 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC13.27□□□□□ -0.29
Vopp1Q8R1C3 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vopp1Q8R1C3 Gm22334-201ENSMUST00000158070 133 ntBASIC13.27□□□□□ -0.29
Vopp1Q8R1C3 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vopp1Q8R1C3 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC13.27□□□□□ -0.29
Vopp1Q8R1C3 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC13.27□□□□□ -0.29
Vopp1Q8R1C3 Gm19353-201ENSMUST00000184561 445 ntBASIC13.27□□□□□ -0.29
Vopp1Q8R1C3 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC13.27□□□□□ -0.29
Vopp1Q8R1C3 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.27□□□□□ -0.29
Vopp1Q8R1C3 Gm42997-202ENSMUST00000200321 985 ntBASIC13.27□□□□□ -0.29
Vopp1Q8R1C3 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Vopp1Q8R1C3 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC13.27□□□□□ -0.29
Vopp1Q8R1C3 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vopp1Q8R1C3 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Vopp1Q8R1C3 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vopp1Q8R1C3 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Vopp1Q8R1C3 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vopp1Q8R1C3 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Vopp1Q8R1C3 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Vopp1Q8R1C3 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Vopp1Q8R1C3 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vopp1Q8R1C3 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Vopp1Q8R1C3 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vopp1Q8R1C3 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Vopp1Q8R1C3 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Vopp1Q8R1C3 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.27□□□□□ -0.29
Vopp1Q8R1C3 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vopp1Q8R1C3 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vopp1Q8R1C3 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vopp1Q8R1C3 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Vopp1Q8R1C3 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vopp1Q8R1C3 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vopp1Q8R1C3 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Vopp1Q8R1C3 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
Vopp1Q8R1C3 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Vopp1Q8R1C3 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vopp1Q8R1C3 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
Vopp1Q8R1C3 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Vopp1Q8R1C3 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vopp1Q8R1C3 Gm13035-201ENSMUST00000117496 342 ntBASIC13.26□□□□□ -0.29
Vopp1Q8R1C3 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC13.26□□□□□ -0.29
Vopp1Q8R1C3 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vopp1Q8R1C3 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Vopp1Q8R1C3 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC13.26□□□□□ -0.29
Vopp1Q8R1C3 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vopp1Q8R1C3 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Vopp1Q8R1C3 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC13.26□□□□□ -0.29
Vopp1Q8R1C3 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vopp1Q8R1C3 Gm24514-201ENSMUST00000174961 285 ntBASIC13.26□□□□□ -0.29
Vopp1Q8R1C3 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms