Protein–RNA interactions for Protein: Q8K558

Treml1, Trem-like transcript 1 protein, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml1Q8K558 Gm10478-201ENSMUST00000084451 396 ntBASIC12.51□□□□□ -0.41
Treml1Q8K558 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Treml1Q8K558 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Treml1Q8K558 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Treml1Q8K558 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.51□□□□□ -0.41
Treml1Q8K558 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Treml1Q8K558 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Treml1Q8K558 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Treml1Q8K558 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Treml1Q8K558 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Treml1Q8K558 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.5□□□□□ -0.41
Treml1Q8K558 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Treml1Q8K558 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.5□□□□□ -0.41
Treml1Q8K558 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Treml1Q8K558 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Treml1Q8K558 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Treml1Q8K558 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Treml1Q8K558 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Treml1Q8K558 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Treml1Q8K558 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Treml1Q8K558 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Treml1Q8K558 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Treml1Q8K558 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Treml1Q8K558 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.5□□□□□ -0.41
Treml1Q8K558 Gm43133-201ENSMUST00000197472 463 ntBASIC12.5□□□□□ -0.41
Treml1Q8K558 Gm19309-201ENSMUST00000218295 205 ntBASIC12.5□□□□□ -0.41
Treml1Q8K558 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Treml1Q8K558 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Treml1Q8K558 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Treml1Q8K558 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.5□□□□□ -0.41
Treml1Q8K558 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Treml1Q8K558 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Treml1Q8K558 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Treml1Q8K558 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Treml1Q8K558 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Treml1Q8K558 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Treml1Q8K558 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Treml1Q8K558 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Treml1Q8K558 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.5□□□□□ -0.41
Treml1Q8K558 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Treml1Q8K558 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Treml1Q8K558 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Treml1Q8K558 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Treml1Q8K558 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Treml1Q8K558 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Treml1Q8K558 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Treml1Q8K558 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Treml1Q8K558 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Treml1Q8K558 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Treml1Q8K558 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Treml1Q8K558 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Treml1Q8K558 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.49□□□□□ -0.41
Treml1Q8K558 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.49□□□□□ -0.41
Treml1Q8K558 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Treml1Q8K558 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Treml1Q8K558 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Treml1Q8K558 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Treml1Q8K558 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Treml1Q8K558 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.49□□□□□ -0.41
Treml1Q8K558 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Treml1Q8K558 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Treml1Q8K558 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Treml1Q8K558 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Treml1Q8K558 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Treml1Q8K558 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Treml1Q8K558 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Treml1Q8K558 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Treml1Q8K558 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.49□□□□□ -0.41
Treml1Q8K558 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Treml1Q8K558 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.49□□□□□ -0.41
Treml1Q8K558 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.49□□□□□ -0.41
Treml1Q8K558 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Treml1Q8K558 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.49□□□□□ -0.41
Treml1Q8K558 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.49□□□□□ -0.41
Treml1Q8K558 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.49□□□□□ -0.41
Treml1Q8K558 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.49□□□□□ -0.41
Treml1Q8K558 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Treml1Q8K558 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Treml1Q8K558 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Treml1Q8K558 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Treml1Q8K558 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Treml1Q8K558 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Treml1Q8K558 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.49□□□□□ -0.41
Treml1Q8K558 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Treml1Q8K558 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Treml1Q8K558 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Treml1Q8K558 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Treml1Q8K558 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Treml1Q8K558 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Treml1Q8K558 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Treml1Q8K558 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Treml1Q8K558 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.48□□□□□ -0.41
Treml1Q8K558 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Treml1Q8K558 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Treml1Q8K558 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Treml1Q8K558 Gm6023-201ENSMUST00000118217 606 ntBASIC12.48□□□□□ -0.41
Treml1Q8K558 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.48□□□□□ -0.41
Treml1Q8K558 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.48□□□□□ -0.41
Treml1Q8K558 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Treml1Q8K558 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms