Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cchcr1Q8K2I2 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cchcr1Q8K2I2 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC15.03■□□□□ -0
Cchcr1Q8K2I2 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cchcr1Q8K2I2 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cchcr1Q8K2I2 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Cchcr1Q8K2I2 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Cchcr1Q8K2I2 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC15.03■□□□□ -0
Cchcr1Q8K2I2 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC15.03■□□□□ -0
Cchcr1Q8K2I2 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC15.03■□□□□ -0
Cchcr1Q8K2I2 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cchcr1Q8K2I2 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cchcr1Q8K2I2 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cchcr1Q8K2I2 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Cchcr1Q8K2I2 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cchcr1Q8K2I2 Gm9002-201ENSMUST00000178437 499 ntBASIC15.03■□□□□ -0
Cchcr1Q8K2I2 Gm6652-201ENSMUST00000186414 1070 ntBASIC15.03■□□□□ -0
Cchcr1Q8K2I2 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cchcr1Q8K2I2 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC15.03■□□□□ -0
Cchcr1Q8K2I2 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cchcr1Q8K2I2 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC15.03■□□□□ -0
Cchcr1Q8K2I2 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cchcr1Q8K2I2 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cchcr1Q8K2I2 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cchcr1Q8K2I2 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cchcr1Q8K2I2 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cchcr1Q8K2I2 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Cchcr1Q8K2I2 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cchcr1Q8K2I2 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cchcr1Q8K2I2 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cchcr1Q8K2I2 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Cchcr1Q8K2I2 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cchcr1Q8K2I2 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Cchcr1Q8K2I2 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Cchcr1Q8K2I2 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cchcr1Q8K2I2 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC15.02■□□□□ -0
Cchcr1Q8K2I2 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cchcr1Q8K2I2 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Cchcr1Q8K2I2 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Cchcr1Q8K2I2 Gm5780-201ENSMUST00000217774 1834 ntBASIC15.02■□□□□ -0
Cchcr1Q8K2I2 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cchcr1Q8K2I2 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC15.02■□□□□ -0
Cchcr1Q8K2I2 Gm13369-201ENSMUST00000119442 987 ntBASIC15.02■□□□□ -0
Cchcr1Q8K2I2 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC15.02■□□□□ -0
Cchcr1Q8K2I2 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cchcr1Q8K2I2 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cchcr1Q8K2I2 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC15.02■□□□□ -0
Cchcr1Q8K2I2 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC15.02■□□□□ -0
Cchcr1Q8K2I2 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cchcr1Q8K2I2 Gm27892-201ENSMUST00000185017 106 ntBASIC15.02■□□□□ -0
Cchcr1Q8K2I2 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC15.02■□□□□ -0
Cchcr1Q8K2I2 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC15.02■□□□□ -0
Cchcr1Q8K2I2 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cchcr1Q8K2I2 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cchcr1Q8K2I2 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC15.02□□□□□ -0.01
Cchcr1Q8K2I2 Gm6992-201ENSMUST00000217973 1607 ntBASIC15.02□□□□□ -0.01
Cchcr1Q8K2I2 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC15.02□□□□□ -0.01
Cchcr1Q8K2I2 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cchcr1Q8K2I2 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cchcr1Q8K2I2 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cchcr1Q8K2I2 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cchcr1Q8K2I2 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cchcr1Q8K2I2 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cchcr1Q8K2I2 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC15.01□□□□□ -0.01
Cchcr1Q8K2I2 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cchcr1Q8K2I2 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cchcr1Q8K2I2 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Cchcr1Q8K2I2 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cchcr1Q8K2I2 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC15.01□□□□□ -0.01
Cchcr1Q8K2I2 Gm7049-201ENSMUST00000223520 1712 ntBASIC15.01□□□□□ -0.01
Cchcr1Q8K2I2 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cchcr1Q8K2I2 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cchcr1Q8K2I2 Gm13050-201ENSMUST00000122149 1345 ntBASIC15.01□□□□□ -0.01
Cchcr1Q8K2I2 Gm44758-201ENSMUST00000206096 2068 ntBASIC15.01□□□□□ -0.01
Cchcr1Q8K2I2 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC15.01□□□□□ -0.01
Cchcr1Q8K2I2 Gm12960-201ENSMUST00000120017 1066 ntBASIC15.01□□□□□ -0.01
Cchcr1Q8K2I2 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC15.01□□□□□ -0.01
Cchcr1Q8K2I2 AC155237.1-201ENSMUST00000226196 1279 ntBASIC15.01□□□□□ -0.01
Cchcr1Q8K2I2 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cchcr1Q8K2I2 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cchcr1Q8K2I2 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cchcr1Q8K2I2 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cchcr1Q8K2I2 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cchcr1Q8K2I2 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cchcr1Q8K2I2 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cchcr1Q8K2I2 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cchcr1Q8K2I2 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cchcr1Q8K2I2 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cchcr1Q8K2I2 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cchcr1Q8K2I2 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cchcr1Q8K2I2 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cchcr1Q8K2I2 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Cchcr1Q8K2I2 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC15□□□□□ -0.01
Cchcr1Q8K2I2 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Cchcr1Q8K2I2 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cchcr1Q8K2I2 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC15□□□□□ -0.01
Cchcr1Q8K2I2 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC15□□□□□ -0.01
Cchcr1Q8K2I2 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cchcr1Q8K2I2 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cchcr1Q8K2I2 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms