Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Gm26361-201ENSMUST00000158868 186 ntBASIC16.42■□□□□ 0.22
Rab11fip3Q8CHD8 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Rab11fip3Q8CHD8 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC16.42■□□□□ 0.22
Rab11fip3Q8CHD8 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC16.42■□□□□ 0.22
Rab11fip3Q8CHD8 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab11fip3Q8CHD8 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC16.42■□□□□ 0.22
Rab11fip3Q8CHD8 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC16.42■□□□□ 0.22
Rab11fip3Q8CHD8 Gm39404-201ENSMUST00000216350 313 ntBASIC16.42■□□□□ 0.22
Rab11fip3Q8CHD8 Gm7293-201ENSMUST00000216682 1007 ntBASIC16.42■□□□□ 0.22
Rab11fip3Q8CHD8 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab11fip3Q8CHD8 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab11fip3Q8CHD8 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab11fip3Q8CHD8 Gm44851-201ENSMUST00000205735 2309 ntBASIC16.42■□□□□ 0.22
Rab11fip3Q8CHD8 Retreg1-206ENSMUST00000228306 1430 ntBASIC16.42■□□□□ 0.22
Rab11fip3Q8CHD8 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab11fip3Q8CHD8 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab11fip3Q8CHD8 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab11fip3Q8CHD8 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab11fip3Q8CHD8 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rab11fip3Q8CHD8 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab11fip3Q8CHD8 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC16.42■□□□□ 0.22
Rab11fip3Q8CHD8 Gm5385-201ENSMUST00000118988 1559 ntBASIC16.42■□□□□ 0.22
Rab11fip3Q8CHD8 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rab11fip3Q8CHD8 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab11fip3Q8CHD8 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab11fip3Q8CHD8 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab11fip3Q8CHD8 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC16.41■□□□□ 0.22
Rab11fip3Q8CHD8 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
Rab11fip3Q8CHD8 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab11fip3Q8CHD8 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab11fip3Q8CHD8 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Rab11fip3Q8CHD8 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab11fip3Q8CHD8 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab11fip3Q8CHD8 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab11fip3Q8CHD8 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC16.41■□□□□ 0.22
Rab11fip3Q8CHD8 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab11fip3Q8CHD8 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab11fip3Q8CHD8 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab11fip3Q8CHD8 Gm12015-201ENSMUST00000117065 843 ntBASIC16.41■□□□□ 0.22
Rab11fip3Q8CHD8 Gm13394-201ENSMUST00000121658 1000 ntBASIC16.41■□□□□ 0.22
Rab11fip3Q8CHD8 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC16.41■□□□□ 0.22
Rab11fip3Q8CHD8 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC16.41■□□□□ 0.22
Rab11fip3Q8CHD8 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab11fip3Q8CHD8 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC16.41■□□□□ 0.22
Rab11fip3Q8CHD8 Gm5363-201ENSMUST00000211927 938 ntBASIC16.41■□□□□ 0.22
Rab11fip3Q8CHD8 AC166344.1-202ENSMUST00000224139 234 ntBASIC16.41■□□□□ 0.22
Rab11fip3Q8CHD8 CT030182.1-201ENSMUST00000225935 533 ntBASIC16.41■□□□□ 0.22
Rab11fip3Q8CHD8 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab11fip3Q8CHD8 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab11fip3Q8CHD8 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rab11fip3Q8CHD8 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC16.41■□□□□ 0.22
Rab11fip3Q8CHD8 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab11fip3Q8CHD8 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rab11fip3Q8CHD8 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rab11fip3Q8CHD8 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab11fip3Q8CHD8 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab11fip3Q8CHD8 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab11fip3Q8CHD8 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab11fip3Q8CHD8 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC16.4■□□□□ 0.22
Rab11fip3Q8CHD8 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rab11fip3Q8CHD8 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rab11fip3Q8CHD8 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Rab11fip3Q8CHD8 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rab11fip3Q8CHD8 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Rab11fip3Q8CHD8 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rab11fip3Q8CHD8 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC16.4■□□□□ 0.22
Rab11fip3Q8CHD8 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC16.4■□□□□ 0.22
Rab11fip3Q8CHD8 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rab11fip3Q8CHD8 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rab11fip3Q8CHD8 Gm24845-201ENSMUST00000158034 109 ntBASIC16.4■□□□□ 0.22
Rab11fip3Q8CHD8 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rab11fip3Q8CHD8 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
Rab11fip3Q8CHD8 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC16.4■□□□□ 0.22
Rab11fip3Q8CHD8 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rab11fip3Q8CHD8 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC16.4■□□□□ 0.22
Rab11fip3Q8CHD8 Gm8494-201ENSMUST00000178171 1233 ntBASIC16.4■□□□□ 0.22
Rab11fip3Q8CHD8 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Rab11fip3Q8CHD8 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rab11fip3Q8CHD8 Gm37466-201ENSMUST00000195692 652 ntBASIC16.4■□□□□ 0.22
Rab11fip3Q8CHD8 Gm44651-201ENSMUST00000207343 372 ntBASIC16.4■□□□□ 0.22
Rab11fip3Q8CHD8 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rab11fip3Q8CHD8 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rab11fip3Q8CHD8 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rab11fip3Q8CHD8 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rab11fip3Q8CHD8 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rab11fip3Q8CHD8 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rab11fip3Q8CHD8 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rab11fip3Q8CHD8 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rab11fip3Q8CHD8 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rab11fip3Q8CHD8 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Rab11fip3Q8CHD8 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rab11fip3Q8CHD8 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rab11fip3Q8CHD8 AC151895.1-201ENSMUST00000219025 1742 ntBASIC16.39■□□□□ 0.21
Rab11fip3Q8CHD8 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rab11fip3Q8CHD8 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rab11fip3Q8CHD8 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rab11fip3Q8CHD8 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rab11fip3Q8CHD8 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Rab11fip3Q8CHD8 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rab11fip3Q8CHD8 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms