Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ShfQ8CG80 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.31□□□□□ -0.6
ShfQ8CG80 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ShfQ8CG80 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
ShfQ8CG80 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
ShfQ8CG80 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
ShfQ8CG80 Snord83b-201ENSMUST00000104546 94 ntBASIC11.31□□□□□ -0.6
ShfQ8CG80 Gm16479-201ENSMUST00000121706 932 ntBASIC11.31□□□□□ -0.6
ShfQ8CG80 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.31□□□□□ -0.6
ShfQ8CG80 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.31□□□□□ -0.6
ShfQ8CG80 Gm16296-201ENSMUST00000159905 325 ntBASIC11.31□□□□□ -0.6
ShfQ8CG80 Gm28911-201ENSMUST00000188837 117 ntBASIC11.31□□□□□ -0.6
ShfQ8CG80 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC11.31□□□□□ -0.6
ShfQ8CG80 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
ShfQ8CG80 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC11.31□□□□□ -0.6
ShfQ8CG80 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
ShfQ8CG80 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ShfQ8CG80 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ShfQ8CG80 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ShfQ8CG80 Matn2-203ENSMUST00000226766 3252 ntBASIC11.31□□□□□ -0.6
ShfQ8CG80 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.31□□□□□ -0.6
ShfQ8CG80 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ShfQ8CG80 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ShfQ8CG80 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.31□□□□□ -0.6
ShfQ8CG80 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ShfQ8CG80 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
ShfQ8CG80 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ShfQ8CG80 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ShfQ8CG80 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
ShfQ8CG80 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ShfQ8CG80 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
ShfQ8CG80 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
ShfQ8CG80 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
ShfQ8CG80 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ShfQ8CG80 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ShfQ8CG80 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
ShfQ8CG80 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
ShfQ8CG80 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.31□□□□□ -0.6
ShfQ8CG80 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
ShfQ8CG80 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
ShfQ8CG80 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.3□□□□□ -0.6
ShfQ8CG80 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
ShfQ8CG80 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ShfQ8CG80 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ShfQ8CG80 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
ShfQ8CG80 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.3□□□□□ -0.6
ShfQ8CG80 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
ShfQ8CG80 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
ShfQ8CG80 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
ShfQ8CG80 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
ShfQ8CG80 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
ShfQ8CG80 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.3□□□□□ -0.6
ShfQ8CG80 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
ShfQ8CG80 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.3□□□□□ -0.6
ShfQ8CG80 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
ShfQ8CG80 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
ShfQ8CG80 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ShfQ8CG80 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ShfQ8CG80 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
ShfQ8CG80 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ShfQ8CG80 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.3□□□□□ -0.6
ShfQ8CG80 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
ShfQ8CG80 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.3□□□□□ -0.6
ShfQ8CG80 Gm17208-201ENSMUST00000168388 535 ntBASIC11.3□□□□□ -0.6
ShfQ8CG80 Mir6977-201ENSMUST00000184960 64 ntBASIC11.3□□□□□ -0.6
ShfQ8CG80 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
ShfQ8CG80 Gm6473-201ENSMUST00000188572 1210 ntBASIC11.3□□□□□ -0.6
ShfQ8CG80 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.3□□□□□ -0.6
ShfQ8CG80 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.3□□□□□ -0.6
ShfQ8CG80 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.3□□□□□ -0.6
ShfQ8CG80 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.3□□□□□ -0.6
ShfQ8CG80 Gm37497-201ENSMUST00000195830 798 ntBASIC11.3□□□□□ -0.6
ShfQ8CG80 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC11.3□□□□□ -0.6
ShfQ8CG80 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC11.3□□□□□ -0.6
ShfQ8CG80 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ShfQ8CG80 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.3□□□□□ -0.6
ShfQ8CG80 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ShfQ8CG80 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ShfQ8CG80 Gm2423-201ENSMUST00000074863 733 ntBASIC11.3□□□□□ -0.6
ShfQ8CG80 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
ShfQ8CG80 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ShfQ8CG80 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
ShfQ8CG80 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
ShfQ8CG80 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
ShfQ8CG80 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
ShfQ8CG80 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ShfQ8CG80 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
ShfQ8CG80 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
ShfQ8CG80 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
ShfQ8CG80 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
ShfQ8CG80 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
ShfQ8CG80 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ShfQ8CG80 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
ShfQ8CG80 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ShfQ8CG80 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
ShfQ8CG80 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
ShfQ8CG80 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.29□□□□□ -0.6
ShfQ8CG80 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ShfQ8CG80 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
ShfQ8CG80 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms