Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lrif1Q8CDD9 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lrif1Q8CDD9 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lrif1Q8CDD9 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lrif1Q8CDD9 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.58□□□□□ -0.4
Lrif1Q8CDD9 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lrif1Q8CDD9 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lrif1Q8CDD9 Gm11524-201ENSMUST00000119349 807 ntBASIC12.58□□□□□ -0.4
Lrif1Q8CDD9 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.58□□□□□ -0.4
Lrif1Q8CDD9 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lrif1Q8CDD9 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lrif1Q8CDD9 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.58□□□□□ -0.4
Lrif1Q8CDD9 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.58□□□□□ -0.4
Lrif1Q8CDD9 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.58□□□□□ -0.4
Lrif1Q8CDD9 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lrif1Q8CDD9 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lrif1Q8CDD9 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lrif1Q8CDD9 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lrif1Q8CDD9 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.58□□□□□ -0.4
Lrif1Q8CDD9 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lrif1Q8CDD9 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lrif1Q8CDD9 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Lrif1Q8CDD9 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Lrif1Q8CDD9 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.58□□□□□ -0.4
Lrif1Q8CDD9 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Lrif1Q8CDD9 Map1b-203ENSMUST00000223725 2669 ntBASIC12.58□□□□□ -0.4
Lrif1Q8CDD9 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lrif1Q8CDD9 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Lrif1Q8CDD9 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lrif1Q8CDD9 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lrif1Q8CDD9 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lrif1Q8CDD9 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lrif1Q8CDD9 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lrif1Q8CDD9 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.57□□□□□ -0.4
Lrif1Q8CDD9 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lrif1Q8CDD9 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lrif1Q8CDD9 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lrif1Q8CDD9 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lrif1Q8CDD9 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.57□□□□□ -0.4
Lrif1Q8CDD9 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Lrif1Q8CDD9 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lrif1Q8CDD9 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lrif1Q8CDD9 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lrif1Q8CDD9 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lrif1Q8CDD9 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lrif1Q8CDD9 Gm28911-201ENSMUST00000188837 117 ntBASIC12.57□□□□□ -0.4
Lrif1Q8CDD9 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.57□□□□□ -0.4
Lrif1Q8CDD9 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lrif1Q8CDD9 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lrif1Q8CDD9 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Lrif1Q8CDD9 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Lrif1Q8CDD9 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lrif1Q8CDD9 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.57□□□□□ -0.4
Lrif1Q8CDD9 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lrif1Q8CDD9 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Lrif1Q8CDD9 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Lrif1Q8CDD9 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lrif1Q8CDD9 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lrif1Q8CDD9 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lrif1Q8CDD9 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lrif1Q8CDD9 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.57□□□□□ -0.4
Lrif1Q8CDD9 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lrif1Q8CDD9 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.57□□□□□ -0.4
Lrif1Q8CDD9 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lrif1Q8CDD9 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lrif1Q8CDD9 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lrif1Q8CDD9 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lrif1Q8CDD9 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lrif1Q8CDD9 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lrif1Q8CDD9 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lrif1Q8CDD9 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lrif1Q8CDD9 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lrif1Q8CDD9 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lrif1Q8CDD9 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lrif1Q8CDD9 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lrif1Q8CDD9 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lrif1Q8CDD9 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lrif1Q8CDD9 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Lrif1Q8CDD9 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lrif1Q8CDD9 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lrif1Q8CDD9 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lrif1Q8CDD9 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Lrif1Q8CDD9 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Lrif1Q8CDD9 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lrif1Q8CDD9 Gm12138-201ENSMUST00000122180 951 ntBASIC12.56□□□□□ -0.4
Lrif1Q8CDD9 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.56□□□□□ -0.4
Lrif1Q8CDD9 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lrif1Q8CDD9 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.56□□□□□ -0.4
Lrif1Q8CDD9 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.56□□□□□ -0.4
Lrif1Q8CDD9 Gm19078-201ENSMUST00000206311 727 ntBASIC12.56□□□□□ -0.4
Lrif1Q8CDD9 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Lrif1Q8CDD9 Gm24447-201ENSMUST00000083977 338 ntBASIC12.56□□□□□ -0.4
Lrif1Q8CDD9 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lrif1Q8CDD9 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lrif1Q8CDD9 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lrif1Q8CDD9 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lrif1Q8CDD9 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lrif1Q8CDD9 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lrif1Q8CDD9 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Lrif1Q8CDD9 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms